RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SH3BGRL2Q9UJC5 107 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 KLHL20Q9Y2M5 609 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 HYOU1Q9Y4L1 999 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 MED13LQ71F56 2210 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 NUP210LQ5VU65 1888 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 hCG_1818297A0A087WSY0 165 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 NSG1A0A0A6YYJ2 146 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 SLC5A10A0PJK1 596 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 FITM1A5D6W6 292 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 BHMG1C9JSJ3 638 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 AKR1B10O60218 316 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 UQCRHP07919 91 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 PRR35P0CG20 571 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 PRSS56P0CW18 603 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 CAPN3P20807 821 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 COMTP21964 271 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 PSMB4P28070 264 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 RBL1P28749 1068 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 TPM4P67936 248 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 OCA2Q04671 838 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 CACNG1Q06432 222 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 KLC1Q07866 573 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 IQCB1Q15051 598 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 DBN1Q16643 649 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 FAM214AQ32MH5 1076 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 ATG9BQ674R7 924 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 PIANPQ8IYJ0 282 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 LINC01555Q8NAE3 123 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 STT3BQ8TCJ2 826 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 PSMF1Q92530 271 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 MIEF2Q96C03 454 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 C8orf44Q96CB5 159 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 LRRC45Q96CN5 670 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 ZNF285Q96NJ3 590 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 SELENOSQ9BQE4 189 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 MESP1Q9BRJ9 268 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 PLA2G3Q9NZ20 509 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 ZNF282Q9UDV7 671 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 C3orf18Q9UK00 162 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 MRPS2Q9Y399 296 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 MAU2Q9Y6X3 613 aa11.28□□□□□ -0.6
GTF3C1-209ENST00000568569 PCNX1Q96RV3 2341 aa11.27□□□□□ -0.6
GTF3C1-209ENST00000568569 H7C0C1 242 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 APOC4-APOC2K7ER74 178 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 SLC19A2O60779 497 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 ZRANB2O95218 330 aaKnown RBP eCLIP11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 BMP10O95393 424 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 S1PR4O95977 384 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 APOC2P02655 101 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 SERPINA7P05543 415 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 ZGLP1P0C6A0 271 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 MYBL2P10244 700 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 COX6A1P12074 109 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 CD9P21926 228 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 MST1P26927 711 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 GRIA3P42263 894 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 ATP5OP48047 213 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 SMSP52788 366 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 ITIH4Q14624 930 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 DNAJC21Q5F1R6 531 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 DENND5AQ6IQ26 1287 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 PRMT9Q6P2P2 845 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 CNSTQ6PJW8 725 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 PACS1Q6VY07 963 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 RIPOR1Q6ZS17 1223 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 NDUFAF7Q7L592 441 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 CDH24Q86UP0 819 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 CCDC50Q8IVM0 306 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 PRSS58Q8IYP2 241 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 SIRT6Q8N6T7 355 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 SUN3Q8TAQ9 357 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 C14orf79Q96F83 325 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 PPP1R2P1Q96PQ5 205 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 TBL1YQ9BQ87 522 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 RNF32Q9H0A6 362 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 ARNT2Q9HBZ2 717 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 ZNF304Q9HCX3 659 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 NLE1Q9NVX2 485 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.27□□□□□ -0.611e-7■■■■□ 23
GTF3C1-209ENST00000568569 PRSS21Q9Y6M0 314 aa11.27□□□□□ -0.61
GTF3C1-209ENST00000568569 A0A1W2PQ72 361 aa11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 HYKKA2RU49 373 aa11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 PRICKLE3O43900 615 aaPredicted RBP11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 SRPX2O60687 465 aaPredicted RBP11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 STK10O94804 968 aaKnown RBP11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 FKBP9O95302 570 aa11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 RPN2P04844 631 aa11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 OR56A5P0C7T3 313 aa11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 ESRRAP11474 423 aaPredicted RBP11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 AP2B1P63010 937 aa11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 ADORA2A-AS1P86434 159 aa11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 SF1Q15637 639 aaKnown RBP11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 ANKRD20A2Q5SQ80 823 aa11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 ANKRD20A1Q5TYW2 823 aa11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 ANKRD20A3Q5VUR7 823 aa11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 FIGLAQ6QHK4 219 aa11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 NAPRTQ6XQN6 538 aa11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 MICALCLQ6ZW33 695 aa11.26□□□□□ -0.61
GTF3C1-209ENST00000568569 BBS12Q6ZW61 710 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms