RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 SLC26A7Q8TE54 656 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 ZNF480Q8WV37 535 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 PPP3R2Q96LZ3 170 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 MTERF1Q99551 399 aaKnown RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 TACO1Q9BSH4 297 aaKnown RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 ZDHHC5Q9C0B5 715 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 LRTM1Q9HBL6 345 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 NOP53Q9NZM5 478 aaKnown RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 NKX1-2Q9UD57 310 aaPredicted RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 SCML1Q9UN30 329 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 KCNE2Q9Y6J6 123 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 NUP214P35658 2090 aaPredicted RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 CCDC154A6NI56 674 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 PDZK1P1A8MUH7 402 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 FUCA1P04066 466 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 CAPN3P20807 821 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 CCND1P24385 295 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 VARSP26640 1264 aaKnown RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 PSME3P61289 254 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 TDGQ13569 410 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 KRT33BQ14525 404 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 PTGR1Q14914 329 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 RCN1Q15293 331 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 TIGD2Q4W5G0 525 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 TMEM259Q4ZIN3 620 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 FRG2Q64ET8 278 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 PTCRAQ6ISU1 281 aaPredicted RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 CYP20A1Q6UW02 462 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 ENPP7Q6UWV6 458 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 NET1Q7Z628 596 aaPredicted RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 GALNT13Q8IUC8 556 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 CLHC1Q8NHS4 586 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 MAGEC3Q8TD91 643 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 NUDT8Q8WV74 236 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 SH3KBP1Q96B97 665 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 SPDL1Q96EA4 605 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 FRG2BQ96QU4 278 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 OR4K3Q96R72 315 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 APOOQ9BUR5 198 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 OR52A5Q9H2C5 316 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 RNPEPL1Q9HAU8 725 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 PREBQ9HCU5 417 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 IMP3Q9NV31 184 aaKnown RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 FZD4Q9ULV1 537 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 MMP17Q9ULZ9 603 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 SUFUQ9UMX1 484 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 EIF3LQ9Y262 564 aaKnown RBP6.86□□□□□ -1.31
SMG1-215ENST00000568239 PLEKHM1Q9Y4G2 1056 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 ST14Q9Y5Y6 855 aa6.86□□□□□ -1.31
SMG1-215ENST00000568239 E7ENX8 843 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 BAG2O95816 211 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 SRFP11831 508 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 PCNAP12004 261 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 FOSL2P15408 326 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 GABRG2P18507 467 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 GNAZP19086 355 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 ACADLP28330 430 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 DPP6P42658 865 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 POLR2JP52435 117 aaKnown RBP6.85□□□□□ -1.31
SMG1-215ENST00000568239 THOP1P52888 689 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 MTTPP55157 894 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 EMX2Q04743 252 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 SFSWAPQ12872 951 aaKnown RBP6.85□□□□□ -1.31
SMG1-215ENST00000568239 LRP8Q14114 963 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 DOC2AQ14183 400 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 CAPRIN1Q14444 709 aaKnown RBP6.85□□□□□ -1.31
SMG1-215ENST00000568239 MAP7D1Q3KQU3 841 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 ZNF658BQ4V348 819 aaPredicted RBP6.85□□□□□ -1.31
SMG1-215ENST00000568239 CACHD1Q5VU97 1274 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 PDZD3Q86UT5 571 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 RETREG3Q86VR2 466 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 USP7Q93009 1102 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 NEIL2Q969S2 332 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 RAD51AP1Q96B01 352 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 C12orf66Q96MD2 445 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 NRTNQ99748 197 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 SLC29A3Q9BZD2 475 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 ACPTQ9BZG2 426 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 DCLRE1BQ9H816 532 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 CARS2Q9HA77 564 aaKnown RBP6.85□□□□□ -1.31
SMG1-215ENST00000568239 SGK2Q9HBY8 427 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 CROTQ9UKG9 612 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 POMPQ9Y244 141 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 DYRK1BQ9Y463 629 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 KANSL1LA0AUZ9 987 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 LRRC72A6NJI9 287 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 WFS1O76024 890 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 CEACAM5P06731 702 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 JUPP14923 745 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 IL9P15248 144 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 CD22P20273 847 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 SOX11P35716 441 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 CCR3P51677 355 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 ACTR3P61158 418 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 MEF2AQ02078 507 aaPredicted RBP6.85□□□□□ -1.31
SMG1-215ENST00000568239 NFYCQ13952 458 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 UBXN2BQ14CS0 331 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 AGERQ15109 404 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 CATSPEREQ5SY80 951 aa6.85□□□□□ -1.31
SMG1-215ENST00000568239 METRNLQ641Q3 311 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms