RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 CDH4P55283 916 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 CLCA4Q14CN2 919 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 PON2Q15165 354 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 BORAQ6PGQ7 559 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 LINGO2Q7L985 606 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 TMEM199Q8N511 208 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZNF675Q8TD23 568 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 BEX1Q9HBH7 125 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 SPG21Q9NZD8 308 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 DUOX1Q9NRD9 1551 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 C9IYK1 514 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 URODP06132 367 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 TM4SF1P30408 202 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 RPL9P32969 192 aaKnown RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 ATP4BP51164 291 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 GJA9P57773 515 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 RFTN2Q52LD8 501 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 C9orf64Q5T6V5 341 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 SYVN1Q86TM6 617 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 EFHD2Q96C19 240 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 HSH2DQ96JZ2 352 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 COQ3Q9NZJ6 369 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 FZD4Q9ULV1 537 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 CMAHPQ9Y471 501 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 PTGDR2Q9Y5Y4 395 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 ADM5C9JUS6 153 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 SLC1A7O00341 560 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 NRP1O14786 923 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 C1RP00736 705 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 XKP51811 444 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 OR4D2P58180 307 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 ST3GAL4Q11206 333 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 TAF10Q12962 218 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 ADNP2Q6IQ32 1131 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 TOMM5Q8N4H5 51 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 OR10H4Q8NGA5 316 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 NTAN1Q96AB6 310 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 EXOSC8Q96B26 276 aaKnown RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 GTPBP2Q9BX10 602 aaKnown RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 NFKBIZQ9BYH8 718 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 FZD8Q9H461 694 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 NECTIN3Q9NQS3 549 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 PHRF1Q9P1Y6 1649 aaKnown RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 LMO7Q8WWI1 1683 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 DNTTP04053 509 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 DNAJB1P25685 340 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 STOMP27105 288 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 MAGEA2P43356 314 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 CLCN4P51793 760 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 TXNL4AP83876 142 aaKnown RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 ABHD18Q0P651 414 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 GARNL3Q5VVW2 1013 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 CAPN13Q6MZZ7 669 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZNF438Q7Z4V0 828 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 C2orf73Q8N5S3 287 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 OR13J1Q8NGT2 312 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 PPP1R14AQ96A00 147 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 PYCR2Q96C36 320 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 CDKN2AIPNLQ96HQ2 116 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 CYP2S1Q96SQ9 504 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 SLC6A15Q9H2J7 730 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 FAM124BQ9H5Z6 455 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 CPNE5Q9HCH3 593 aa12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 POLR3BQ9NW08 1133 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 RUVBL1Q9Y265 456 aaKnown RBP12.13□□□□□ -0.47
CSPG4P13-202ENST00000567704 SNED1Q8TER0 1413 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 CENPBD1B2RD01 187 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 CXCL11O14625 94 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 GNAO1P09471 354 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 HTR7P34969 479 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 NFKB2Q00653 900 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 HEPACAMQ14CZ8 416 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 PCBP1Q15365 356 aaKnown RBP eCLIP12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 SPATS1Q496A3 300 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 CRB2Q5IJ48 1285 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 TNFAIP8L2Q6P589 184 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 PGBD3Q8N328 593 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 OR4F6Q8NGB9 312 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 RAET1EQ8TD07 263 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 PKP4Q99569 1192 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 TP63Q9H3D4 680 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 ASF1AQ9Y294 204 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 KCTD3Q9Y597 815 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 PDE4DIPQ5VU43 2346 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 C10orf71Q711Q0 1435 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 A8MU76 341 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 B4GAT1O43505 415 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 IFNGP01579 166 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 PRKCGP05129 697 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 GCAP28676 217 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 RGS8P57771 180 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 SNRPD2P62316 118 aaKnown RBP12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 SLC10A7Q0GE19 358 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 DPY19L1Q2PZI1 675 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 KIAA1161Q6NSJ0 714 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 SMARCD3Q6STE5 483 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 RD3Q7Z3Z2 195 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 ADGRD2Q7Z7M1 963 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms