RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 MANEAQ5SRI9 462 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 PLEKHS1Q5SXH7 462 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 TMTC4Q5T4D3 741 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 FAM45BPQ6NSW5 357 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 TTC23LQ6PF05 361 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 CCDC81Q6ZN84 652 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 OTOAQ7RTW8 1153 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 AMIGO1Q86WK6 493 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 ZFAND4Q86XD8 727 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 DTX1Q86Y01 620 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 SLC22A15Q8IZD6 547 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 SIDT2Q8NBJ9 832 aaKnown RBP13.02□□□□□ -0.33
CLK3-218ENST00000566926 OR52E1Q8NGJ3 308 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 OR5K2Q8NHB8 316 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 FAM45AQ8TCE6 357 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 TSNARE1Q96NA8 513 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 MAP3K3Q99759 626 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 SELENOSQ9BQE4 189 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 HGH1Q9BTY7 390 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 PRORYQ9H606 182 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 POPDC3Q9HBV1 291 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 PDE7BQ9NP56 450 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 C1GALT1Q9NS00 363 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 SIDT1Q9NXL6 827 aaKnown RBP13.02□□□□□ -0.33
CLK3-218ENST00000566926 DCDC2Q9UHG0 476 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 TLK1Q9UKI8 766 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 SEC16AO15027 2179 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 LAMA5O15230 3695 aa13.02□□□□□ -0.33
CLK3-218ENST00000566926 A0A087X1B8 175 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 IGHV5-51A0A0C4DH38 117 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 TEX51A0A1B0GUA7 166 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 FAM95CA0A1B0GW59 222 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 GSAPA4D1B5 854 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 C2orf74A8MZ97 194 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 COPEO14579 308 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 POLR3GO15318 223 aaPredicted RBP13.01□□□□□ -0.33
CLK3-218ENST00000566926 KIF1CO43896 1103 aaKnown RBP13.01□□□□□ -0.33
CLK3-218ENST00000566926 TYROBPO43914 113 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 GLRA3O75311 464 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 SLCO2B1O94956 709 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 ZBTB11O95625 1053 aaPredicted RBP13.01□□□□□ -0.33
CLK3-218ENST00000566926 ALDOAP04075 364 aaKnown RBP13.01□□□□□ -0.33
CLK3-218ENST00000566926 PYGBP11216 843 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 STMN1P16949 149 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 POLR2CP19387 275 aaPredicted RBP13.01□□□□□ -0.33
CLK3-218ENST00000566926 CDH3P22223 829 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 GABRB3P28472 473 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 KPNA2P52292 529 aaKnown RBP13.01□□□□□ -0.33
CLK3-218ENST00000566926 RAB10P61026 200 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 HSD11B2P80365 405 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 MPP1Q00013 466 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 PRKG2Q13237 762 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 BMPR2Q13873 1038 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 USP10Q14694 798 aaKnown RBP13.01□□□□□ -0.33
CLK3-218ENST00000566926 ZKSCAN8Q15776 578 aaPredicted RBP13.01□□□□□ -0.33
CLK3-218ENST00000566926 UNC5DQ6UXZ4 953 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 SH2D5Q6ZV89 423 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 IL22RA1Q8N6P7 574 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 BANPQ8N9N5 519 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 ZSCAN1Q8NBB4 408 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 OR5AR1Q8NGP9 310 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 LPGAT1Q92604 370 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 ZBTB9Q96C00 473 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 SLC41A2Q96JW4 573 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 FOPNLQ96NB1 174 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 FCRL4Q96PJ5 515 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 OR6C1Q96RD1 312 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 KCNK9Q9NPC2 374 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 SNX15Q9NRS6 342 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 SLC17A6Q9P2U8 582 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 TDRKHQ9Y2W6 561 aaKnown RBP13.01□□□□□ -0.33
CLK3-218ENST00000566926 ANKRD12Q6UB98 2062 aa13.01□□□□□ -0.33
CLK3-218ENST00000566926 A0A1W2PPM1 405 aa13□□□□□ -0.33
CLK3-218ENST00000566926 CCDC189A1A4V9 331 aa13□□□□□ -0.33
CLK3-218ENST00000566926 PIPSLA2A3N6 862 aa13□□□□□ -0.33
CLK3-218ENST00000566926 IQCF5A8MTL0 148 aa13□□□□□ -0.33
CLK3-218ENST00000566926 E5RI56 91 aa13□□□□□ -0.33
CLK3-218ENST00000566926 K7ENP7 123 aa13□□□□□ -0.33
CLK3-218ENST00000566926 HAUS5O94927 633 aa13□□□□□ -0.33
CLK3-218ENST00000566926 FGF5P12034 268 aa13□□□□□ -0.33
CLK3-218ENST00000566926 PKMP14618 531 aaKnown RBP13□□□□□ -0.33
CLK3-218ENST00000566926 CHRM3P20309 590 aa13□□□□□ -0.33
CLK3-218ENST00000566926 MAP4P27816 1152 aaKnown RBP13□□□□□ -0.33
CLK3-218ENST00000566926 FMO4P31512 558 aa13□□□□□ -0.33
CLK3-218ENST00000566926 SKIV2L2P42285 1042 aaKnown RBP13□□□□□ -0.33
CLK3-218ENST00000566926 INO80CQ6PI98 192 aaPredicted RBP13□□□□□ -0.33
CLK3-218ENST00000566926 NAPRTQ6XQN6 538 aa13□□□□□ -0.33
CLK3-218ENST00000566926 PPP1R3BQ86XI6 285 aa13□□□□□ -0.33
CLK3-218ENST00000566926 RASGRP3Q8IV61 690 aa13□□□□□ -0.33
CLK3-218ENST00000566926 NLGN4XQ8N0W4 816 aa13□□□□□ -0.33
CLK3-218ENST00000566926 C4orf33Q8N1A6 199 aa13□□□□□ -0.33
CLK3-218ENST00000566926 GPATCH11Q8N954 259 aa13□□□□□ -0.33
CLK3-218ENST00000566926 NLGN4YQ8NFZ3 816 aaPredicted RBP13□□□□□ -0.33
CLK3-218ENST00000566926 MAGEC3Q8TD91 643 aa13□□□□□ -0.33
CLK3-218ENST00000566926 BIRC8Q96P09 236 aa13□□□□□ -0.33
CLK3-218ENST00000566926 CTRCQ99895 268 aa13□□□□□ -0.33
CLK3-218ENST00000566926 EFHD1Q9BUP0 239 aa13□□□□□ -0.33
CLK3-218ENST00000566926 SYTL2Q9HCH5 934 aa13□□□□□ -0.33
CLK3-218ENST00000566926 APMAPQ9HDC9 416 aa13□□□□□ -0.33
CLK3-218ENST00000566926 FBXO6Q9NRD1 293 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms