RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	TMEM135	Q86UB9	458 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	REXO1L1P	Q8IX06	675 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	ADGRF3	Q8IZF5	1079 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	MPP5	Q8N3R9	675 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	RNF10	Q8N5U6	811 aa	Known RBP	6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	GDAP1	Q8TB36	358 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	HM13	Q8TCT9	377 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	C12orf66	Q96MD2	445 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	RANBP9	Q96S59	729 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	SRPK1	Q96SB4	655 aa	Known RBP	6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	WDR83	Q9BRX9	315 aa	Known RBP	6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	KIR3DX1	Q9H7L2	352 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	LRRC40	Q9H9A6	602 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	PLAC1	Q9HBJ0	212 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	LUC7L	Q9NQ29	371 aa	Known RBP	6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	LZTFL1	Q9NQ48	299 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	IMP3	Q9NV31	184 aa	Known RBP	6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	HAUS2	Q9NVX0	235 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	SLC39A1	Q9NY26	324 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	SUCO	Q9UBS9	1254 aa	Known RBP	6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	POMT2	Q9UKY4	750 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	ICK	Q9UPZ9	632 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	BTRC	Q9Y297	605 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	MED16	Q9Y2X0	877 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	AAR2	Q9Y312	384 aa	Known RBP	6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	PKP3	Q9Y446	797 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	TCAF1	Q9Y4C2	921 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	NCKAP5	O14513	1909 aa		6.27	□□□□□ -1.41
TCF4-233	ENST00000566376	RP1L1	Q8IWN7	2480 aa	Predicted RBP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	IQCF5	A8MTL0	148 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	TP73	O15350	636 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	NKX2-8	O15522	239 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	CNOT3	O75175	753 aa	Known RBP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	CBX7	O95931	251 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	GOT2	P00505	430 aa	Known RBP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	VIP	P01282	170 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	ATP1B2	P14415	290 aa	Predicted RBP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	PVR	P15151	417 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	ST6GAL1	P15907	406 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	JUNB	P17275	347 aa	Predicted RBP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	NR1D1	P20393	614 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	ITGAX	P20702	1163 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	MSN	P26038	577 aa	Known RBP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	NMBR	P28336	390 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	AKT1	P31749	480 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	CSTF2	P33240	577 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	BUD31	P41223	144 aa	Predicted RBP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	NAP1L1	P55209	391 aa	Known RBP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	FOXL2	P58012	376 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	RPS18	P62269	152 aa	Known RBP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	GPS2	Q13227	327 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	IL10RA	Q13651	578 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	GBX1	Q14549	363 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	GPR19	Q15760	415 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	CCSMST1	Q4G0I0	132 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	ODF2	Q5BJF6	829 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	CTSL3P	Q5NE16	218 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	TSTD2	Q5T7W7	516 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	CCDC181	Q5TID7	509 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	ZDHHC20	Q5W0Z9	365 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	PWWP2B	Q6NUJ5	590 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	DRICH1	Q6PGQ1	229 aa	Predicted RBP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	FAM198B	Q6UWH4	519 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	UNC5A	Q6ZN44	842 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	ARHGEF18	Q6ZSZ5	1173 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	TRIM73	Q86UV7	250 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	CACNA2D3	Q8IZS8	1091 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	SYCE1	Q8N0S2	351 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	RASGEF1C	Q8N431	466 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	LINC01555	Q8NAE3	123 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	LSM14A	Q8ND56	463 aa	Known RBP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	OR52E1	Q8NGJ3	308 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	OR5AR1	Q8NGP9	310 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	DNAJB8	Q8NHS0	232 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	STYX	Q8WUJ0	223 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	ZNF501	Q96CX3	271 aa	Predicted RBP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	WBP1	Q96G27	269 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	MS4A14	Q96JA4	679 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	SLC45A3	Q96JT2	553 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	OR6C1	Q96RD1	312 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	DPYSL5	Q9BPU6	564 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	HGH1	Q9BTY7	390 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	PITPNM3	Q9BZ71	974 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	P2RY12	Q9H244	342 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	EPB41L1	Q9H4G0	881 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	FAM60A	Q9NP50	221 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	STARD5	Q9NSY2	213 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	GPATCH2	Q9NW75	528 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	SYBU	Q9NX95	663 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	SPHK1	Q9NYA1	384 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	IL1RAPL1	Q9NZN1	696 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	GALP	Q9UBC7	116 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	CRLS1	Q9UJA2	301 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	RUVBL2	Q9Y230	463 aa	Known RBP	6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	PPP2R2C	Q9Y2T4	447 aa		6.26	□□□□□ -1.41
TCF4-233	ENST00000566376	DIDO1	Q9BTC0	2240 aa	Known RBP	6.25	□□□□□ -1.41
TCF4-233	ENST00000566376	CELSR2	Q9HCU4	2923 aa		6.25	□□□□□ -1.41
TCF4-233	ENST00000566376	C17orf113	A0A1B0GUU1	675 aa		6.25	□□□□□ -1.41
TCF4-233	ENST00000566376	TLCD2	A6NGC4	264 aa		6.25	□□□□□ -1.41
TCF4-233	ENST00000566376	C2orf81	A6NN90	581 aa		6.25	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms