RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 HSDL1Q3SXM5 330 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 CMPK2Q5EBM0 449 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 TNFAIP8L3Q5GJ75 292 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 KCTD16Q68DU8 428 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 DUPD1Q68J44 220 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 INO80CQ6PI98 192 aaPredicted RBP4.15□□□□□ -1.74
LINC00561-201ENST00000565815 ANKRD13BQ86YJ7 626 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 PARP16Q8N5Y8 322 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 METTL13Q8N6R0 699 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 FRMD1Q8N878 549 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 ADAMTS15Q8TE58 950 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 UBLCP1Q8WVY7 318 aaPredicted RBP4.15□□□□□ -1.74
LINC00561-201ENST00000565815 PSPC1Q8WXF1 523 aaKnown RBP4.15□□□□□ -1.74
LINC00561-201ENST00000565815 CTNNBL1Q8WYA6 563 aaPredicted RBP4.15□□□□□ -1.74
LINC00561-201ENST00000565815 RAPGEF5Q92565 580 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 INPP5DQ92835 1189 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 SLCO2A1Q92959 643 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 INTS12Q96CB8 462 aaKnown RBP4.15□□□□□ -1.74
LINC00561-201ENST00000565815 MS4A14Q96JA4 679 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 C1QTNF5Q9BXJ0 243 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 ZBP1Q9H171 429 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 AZI2Q9H6S1 392 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 KCNMB3Q9NPA1 279 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.15□□□□□ -1.74
LINC00561-201ENST00000565815 HCN3Q9P1Z3 774 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 CNOT8Q9UFF9 292 aaKnown RBP4.15□□□□□ -1.74
LINC00561-201ENST00000565815 PCDHA12Q9UN75 941 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 PCDHGA5Q9Y5G8 931 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 PLXNA4Q9HCM2 1894 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 ZMYM2Q9UBW7 1377 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 CLUHO75153 1309 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 NFASCO94856 1347 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 TAF4O00268 1085 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 HSPB6O14558 160 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 MAPK13O15264 365 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 MAGEB2O15479 319 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 PI15O43692 258 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 KLK8O60259 260 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 HNRNPCL1O60812 293 aaKnown RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 CYP11B2P19099 503 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 NR2F2P24468 414 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 CD52P31358 61 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 HOXD13P35453 343 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 ALDH7A1P49419 539 aaKnown RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 CLCNKBP51801 687 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 CCNG1P51959 295 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 P2RX3P56373 397 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 DR1Q01658 176 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 ID2Q02363 134 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 HNRNPDQ14103 355 aaKnown RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 MLF2Q15773 248 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 ZKSCAN8Q15776 578 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 ZNF284Q2VY69 593 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 ESCO2Q56NI9 601 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 MTX3Q5HYI7 312 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 TMEM268Q5VZI3 342 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 TXNDC8Q6A555 127 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 DPY19L2P1Q6NXN4 242 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 AADACL2Q6P093 401 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 FAM83HQ6ZRV2 1179 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 RINLQ6ZS11 566 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 ZNF571Q7Z3V5 609 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 PIP4P1Q86T03 277 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 TBC1D26Q86UD7 250 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 GPBP1Q86WP2 473 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 PRIMA1Q86XR5 153 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 KLHL7Q8IXQ5 586 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 RIBC1Q8N443 379 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 SYT2Q8N9I0 419 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 CCDC63Q8NA47 563 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 BBOF1Q8ND07 529 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 SCFD1Q8WVM8 642 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 DNASE1L2Q92874 299 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 MMABQ96EY8 250 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 ZC3HAV1LQ96H79 300 aaKnown RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 FAM81BQ96LP2 452 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 ZNF317Q96PQ6 595 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 PLIN2Q99541 437 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 JPH2Q9BR39 696 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 POLR3CQ9BUI4 534 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 EBF2Q9HAK2 575 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 KIF9Q9HAQ2 790 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 PPANQ9NQ55 473 aaKnown RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 TBC1D22BQ9NU19 505 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 STMND1H3BQB6 276 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 ZBTB5O15062 677 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 RGS16O15492 202 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 RGS11O94810 467 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 NKX2-2O95096 273 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 PRF1P14222 555 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 COX7A2P14406 83 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 PON1P27169 355 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 RPA1P27694 616 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 HPDP32754 393 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 SLC16A2P36021 539 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 SLC12A3P55017 1021 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 MAGOHP61326 146 aaKnown RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 IRX1P78414 480 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 CSTF1Q05048 431 aaKnown RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 CETN1Q12798 172 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms