RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 PNPLA2Q96AD5 504 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 P2RY12Q9H244 342 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 LRRC4CQ9HCJ2 640 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 XAB2Q9HCS7 855 aaKnown RBP17.79■□□□□ 0.44
CLN6-204ENST00000564752 SLAMF7Q9NQ25 335 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 C5AR2Q9P296 337 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 IFT80Q9P2H3 777 aaPredicted RBP17.79■□□□□ 0.44
CLN6-204ENST00000564752 DHCR7Q9UBM7 475 aaKnown RBP17.79■□□□□ 0.44
CLN6-204ENST00000564752 GPN3Q9UHW5 284 aaPredicted RBP17.79■□□□□ 0.44
CLN6-204ENST00000564752 SRPK3Q9UPE1 567 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 PLCL2Q9UPR0 1127 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 CDYLQ9Y232 598 aa17.79■□□□□ 0.44
CLN6-204ENST00000564752 PTRH2Q9Y3E5 179 aaKnown RBP17.79■□□□□ 0.44
CLN6-204ENST00000564752 SPTBN1Q01082 2364 aaKnown RBP17.78■□□□□ 0.44
CLN6-204ENST00000564752 GOLGA8KD6RF30 607 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 GOLGA8TH3BQL2 631 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 GOLGA8MH3BSY2 632 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 GPC4O75487 556 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 RPN2P04844 631 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 MLNP12872 115 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 RPS3P23396 243 aaKnown RBP eCLIP17.78■□□□□ 0.44
CLN6-204ENST00000564752 AOAHP28039 575 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 PKLRP30613 574 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 FOLR3P41439 243 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 RAB28P51157 221 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 RAPSNQ13702 412 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 SLC6A19Q695T7 634 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 MRPL14Q6P1L8 145 aaKnown RBP17.78■□□□□ 0.44
CLN6-204ENST00000564752 CAND1Q86VP6 1230 aaKnown RBP17.78■□□□□ 0.44
CLN6-204ENST00000564752 VRK3Q8IV63 474 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 OR2Y1Q8NGV0 311 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 FER1L6-AS2Q96M78 137 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 MENTQ9BUN1 341 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 LUZP4Q9P127 313 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 NEU2Q9Y3R4 380 aa17.78■□□□□ 0.44
CLN6-204ENST00000564752 KPNA5O15131 536 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 CNOT3O75175 753 aaKnown RBP17.77■□□□□ 0.44
CLN6-204ENST00000564752 AGFG2O95081 481 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 IGHEP01854 428 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 TCP1P17987 556 aaKnown RBP17.77■□□□□ 0.44
CLN6-204ENST00000564752 OGNP20774 298 aaKnown RBP17.77■□□□□ 0.44
CLN6-204ENST00000564752 VARSP26640 1264 aaKnown RBP17.77■□□□□ 0.44
CLN6-204ENST00000564752 GCGRP47871 477 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 TYSND1Q2T9J0 566 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 NKAIN1Q4KMZ8 207 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 PRR30Q53SZ7 412 aaPredicted RBP17.77■□□□□ 0.44
CLN6-204ENST00000564752 DCAF10Q5QP82 559 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 VWA5B1Q5TIE3 1220 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 UNC5DQ6UXZ4 953 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 OTOAQ7RTW8 1153 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 DCUN1D3Q8IWE4 304 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 FAM20CQ8IXL6 584 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 LINC01555Q8NAE3 123 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 MCUQ8NE86 351 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 CFAP61Q8NHU2 1237 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 ZNF669Q96BR6 464 aaPredicted RBP17.77■□□□□ 0.44
CLN6-204ENST00000564752 PTERQ96BW5 349 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 SERPINB12Q96P63 405 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 TXLNGQ9NUQ3 528 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 EURLQ9NYK6 297 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 NDOR1Q9UHB4 597 aa17.77■□□□□ 0.44
CLN6-204ENST00000564752 PCSK5Q92824 1860 aa17.77■□□□□ 0.43
CLN6-204ENST00000564752 SDR42E2A6NKP2 422 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 USP27XA6NNY8 438 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 PEX12O00623 359 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 MAGP20916 626 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 CD9P21926 228 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 DHX34Q14147 1143 aaKnown RBP17.76■□□□□ 0.43
CLN6-204ENST00000564752 GRB7Q14451 532 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 SLC9A5Q14940 896 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 PPP1R7Q15435 360 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 C4orf17Q53FE4 359 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 CTSL3PQ5NE16 218 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 GALNT16Q8N428 558 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 CLEC1AQ8NC01 280 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 SKA2Q8WVK7 121 aaPredicted RBP17.76■□□□□ 0.43
CLN6-204ENST00000564752 LPGAT1Q92604 370 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 TCF12Q99081 682 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 TRIM56Q9BRZ2 755 aaKnown RBP17.76■□□□□ 0.43
CLN6-204ENST00000564752 NDC1Q9BTX1 674 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 SLC22A11Q9NSA0 550 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 IRAK4Q9NWZ3 460 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 P4HTMQ9NXG6 502 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 KLHL20Q9Y2M5 609 aa17.76■□□□□ 0.43
CLN6-204ENST00000564752 FAM237BA0A1B0GVD1 139 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 TCP11X1B4DZS4 312 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 H3BMM5 538 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 SLCO2B1O94956 709 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 UMODP07911 640 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 ATXN8OSP0DMR3 200 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 FMO4P31512 558 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 SOX8P57073 446 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 FOXL2P58012 376 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 MYBPC3Q14896 1274 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 PLEKHN1Q494U1 663 aaPredicted RBP17.75■□□□□ 0.43
CLN6-204ENST00000564752 IGFL3Q6UXB1 125 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 PPP1R32Q7Z5V6 425 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 MCATQ8IVS2 390 aaKnown RBP17.75■□□□□ 0.43
CLN6-204ENST00000564752 PPIL6Q8IXY8 311 aa17.75■□□□□ 0.43
CLN6-204ENST00000564752 LMNTD1Q8N9Z9 388 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms