RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 TM9SF4Q92544 642 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 ZNF285Q96NJ3 590 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 NUDT9Q9BW91 350 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 SLC26A1Q9H2B4 701 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 WDR54Q9H977 334 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 ATP13A2Q9NQ11 1180 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 PLAGL1Q9UM63 463 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 VPS9D1Q9Y2B5 631 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 RELNP78509 3460 aa11.71□□□□□ -0.54
GTF3C1-204ENST00000564664 USP9YO00507 2555 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 A0A1B0GX78 115 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 FITM1A5D6W6 292 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 A6NL46 340 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 IQCF5A8MTL0 148 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 HCRTR1O43613 425 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 PRICKLE3O43900 615 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 C1orf105O95561 183 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 FGGP02679 453 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 ESR1P03372 595 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 ITGAXP20702 1163 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 MAGP20916 626 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 HSD17B2P37059 387 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 BASP1P80723 227 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 MYBPC3Q14896 1274 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 INPP5JQ15735 1006 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 C1orf189Q5VU69 101 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 PRUNE1Q86TP1 453 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 GALNT16Q8N428 558 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 TTC29Q8NA56 475 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 PSMG3-AS1Q96PY0 264 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 SLC29A3Q9BZD2 475 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 P4HTMQ9NXG6 502 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 SPATA7Q9P0W8 599 aa11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 MARCH4Q9P2E8 410 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 DHCR7Q9UBM7 475 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 NXT1Q9UKK6 140 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 TTC7AQ9ULT0 858 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-204ENST00000564664 PRRC2CQ9Y520 2896 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 ESPL1Q14674 2120 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 AGPSO00116 658 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 DSCR3O14972 297 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 NRDCO43847 1150 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 PHF2O75151 1096 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 VAPBO95292 243 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 MATN4O95460 622 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 PAMP19021 973 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 MMP11P24347 488 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 NMBRP28336 390 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 GRIA3P42263 894 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 MAGEA6P43360 314 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 EMP3P54852 163 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 AIMP2Q13155 320 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 CYP2A13Q16696 494 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 DEFB110Q30KQ9 67 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 FAM69BQ5VUD6 431 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 FCRL6Q6DN72 434 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 LDB1Q86U70 411 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 KRT222Q8N1A0 295 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 RBMXL3Q8N7X1 1067 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 LKAAEAR1Q8TD35 194 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 COG1Q8WTW3 980 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 BIRC8Q96P09 236 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 SELENOSQ9BQE4 189 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 CUTCQ9NTM9 273 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 CUEDC1Q9NWM3 386 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 UTP6Q9NYH9 597 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 KLHL42Q9P2K6 505 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 SOX13Q9UN79 622 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 B3GNT3Q9Y2A9 372 aa11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 USP9XQ93008 2570 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-204ENST00000564664 TNRC6AQ8NDV7 1962 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 ZNF839A8K0R7 811 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 CEP104O60308 925 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 UMODP07911 640 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 MLNP12872 115 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 OGNP20774 298 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 EIF3BP55884 814 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 CRADDP78560 199 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 RELAQ04206 551 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 ARHGAP19Q14CB8 494 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 TYSND1Q2T9J0 566 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 ANKRD20A4Q4UJ75 823 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 SLC6A19Q695T7 634 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 KIAA0930Q6ICG6 404 aaPredicted RBP11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 PRMT9Q6P2P2 845 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 TTLL10Q6ZVT0 673 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 NEK10Q6ZWH5 1172 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 PPP1R32Q7Z5V6 425 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 ZADH2Q8N4Q0 377 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 SKA2Q8WVK7 121 aaPredicted RBP11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 LPGAT1Q92604 370 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 MFSD3Q96ES6 412 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 IL17FQ96PD4 163 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 LRRC4CQ9HCJ2 640 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 LZTFL1Q9NQ48 299 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 FAM114A2Q9NRY5 505 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 SEMA3GQ9NS98 782 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 SLC22A11Q9NSA0 550 aa11.68□□□□□ -0.54
GTF3C1-204ENST00000564664 INTS10Q9NVR2 710 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms