RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CTR9Q6PD62 1173 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 ZNF613Q6PF04 617 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 PXKQ7Z7A4 578 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 TSPAN33Q86UF1 283 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 CNPY4Q8N129 248 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 BMPERQ8N8U9 685 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 ETNPPLQ8TBG4 499 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 METTL6Q8TCB7 284 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 TRPC4APQ8TEL6 797 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 SLC47A1Q96FL8 570 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 EGLN2Q96KS0 407 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 CFAP53Q96M91 514 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 NUDCD1Q96RS6 583 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 VGLL1Q99990 258 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 SDF4Q9BRK5 362 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 SYT11Q9BT88 431 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 SYNCQ9H7C4 482 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 PANK3Q9H999 370 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 ZNF71Q9NQZ8 489 aaPredicted RBP3.79□□□□□ -1.8
CHD9-212ENST00000564641 DIAPH3Q9NSV4 1193 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 ANKEF1Q9NU02 776 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 MTMR10Q9NXD2 777 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 TRMT1Q9NXH9 659 aaKnown RBP3.79□□□□□ -1.8
CHD9-212ENST00000564641 KLHL8Q9P2G9 620 aaPredicted RBP3.79□□□□□ -1.8
CHD9-212ENST00000564641 POLKQ9UBT6 870 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 DBNLQ9UJU6 430 aaKnown RBP3.79□□□□□ -1.8
CHD9-212ENST00000564641 VPS28Q9UK41 221 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 PYGO1Q9Y3Y4 419 aa3.79□□□□□ -1.8
CHD9-212ENST00000564641 C4AP0C0L4 1744 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 KIF7Q2M1P5 1343 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 A0A087WW49 117 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 NPIPB15A6NHN6 443 aaPredicted RBP3.78□□□□□ -1.8
CHD9-212ENST00000564641 E9PQ18 207 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 KCNK5O95279 499 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 ACTN1P12814 892 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 CDH2P19022 906 aaPredicted RBP3.78□□□□□ -1.8
CHD9-212ENST00000564641 HRH2P25021 359 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 ARL3P36405 182 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 CRKLP46109 303 aaKnown RBP3.78□□□□□ -1.8
CHD9-212ENST00000564641 SNRPD1P62314 119 aaKnown RBP3.78□□□□□ -1.8
CHD9-212ENST00000564641 TEAD2Q15562 447 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 TBCEQ15813 527 aaPredicted RBP3.78□□□□□ -1.8
CHD9-212ENST00000564641 UGP2Q16851 508 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 CTU2Q2VPK5 515 aaKnown RBP3.78□□□□□ -1.8
CHD9-212ENST00000564641 ZDHHC20Q5W0Z9 365 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 OR8K5Q8NH50 307 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 TMEM143Q96AN5 459 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 CABLES2Q9BTV7 478 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 FLRT3Q9NZU0 649 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 TBC1D29Q9UFV1 150 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 DDX49Q9Y6V7 483 aaKnown RBP3.78□□□□□ -1.8
CHD9-212ENST00000564641 PXDNLA1KZ92 1463 aa3.78□□□□□ -1.8
CHD9-212ENST00000564641 KDRP35968 1356 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 CARMIL3Q8ND23 1372 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 TP53BP1Q12888 1972 aaPredicted RBP3.77□□□□□ -1.81
CHD9-212ENST00000564641 IGLV7-46A0A075B6I9 117 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 A0A1W2PQF6 199 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 OR2M5A3KFT3 312 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 GLTPD2A6NH11 291 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 SCAMP1O15126 338 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 TGFB1I1O43294 461 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 AP2A2O94973 939 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 H1F0P07305 194 aaKnown RBP3.77□□□□□ -1.81
CHD9-212ENST00000564641 NFKBIAP25963 317 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 U2AF2P26368 475 aaKnown RBP eCLIP3.77□□□□□ -1.814e-6■□□□□ 10.9
CHD9-212ENST00000564641 ICAM3P32942 547 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 PSMB10P40306 273 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 PIK3CAP42336 1068 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 NIPAL4Q0D2K0 466 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 LRIF1Q5T3J3 769 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 C20orf194Q5TEA3 1177 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 CREBRFQ8IUR6 639 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 ARHGAP12Q8IWW6 846 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 CNTROBQ8N137 903 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 SCML4Q8N228 414 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 NKAIN3Q8N8D7 197 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 MOAP1Q96BY2 351 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 AGAP3Q96P47 875 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 MYCBPQ99417 103 aaPredicted RBP3.77□□□□□ -1.81
CHD9-212ENST00000564641 ITPAQ9BY32 194 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 DENND2DQ9H6A0 471 aaPredicted RBP3.77□□□□□ -1.81
CHD9-212ENST00000564641 PTTG2Q9NZH5 202 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 TMEM181Q9P2C4 612 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 DNAJB4Q9UDY4 337 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 NARFQ9UHQ1 456 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 R3HDM2Q9Y2K5 976 aaKnown RBP3.77□□□□□ -1.81
CHD9-212ENST00000564641 LYVE1Q9Y5Y7 322 aa3.77□□□□□ -1.81
CHD9-212ENST00000564641 COL5A3P25940 1745 aaPredicted RBP3.77□□□□□ -1.81
CHD9-212ENST00000564641 N4BP2Q86UW6 1770 aaPredicted RBP3.76□□□□□ -1.81
CHD9-212ENST00000564641 SCN11AQ9UI33 1791 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 WDR90Q96KV7 1748 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 TOGARAM1Q9Y4F4 1720 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 BRCA1P38398 1863 aaKnown RBP3.76□□□□□ -1.81
CHD9-212ENST00000564641 IGHV4-61A0A0C4DH41 118 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 TEX13DA0A0J9YY54 714 aaPredicted RBP3.76□□□□□ -1.81
CHD9-212ENST00000564641 AGAP14A8MT82 685 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 AHCYL1O43865 530 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 ZNF217O75362 1048 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 TSPAN9O75954 239 aa3.76□□□□□ -1.81
CHD9-212ENST00000564641 ZFAND5O76080 213 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms