RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 CHEK2O96017 543 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 ENO1P06733 434 aaKnown RBP12.42□□□□□ -0.42
CLK3-214ENST00000564096 RETP07949 1114 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 SLC19A1P41440 591 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 CBX1P83916 185 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 TAP2Q03519 686 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 GPR18Q14330 331 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 GRB7Q14451 532 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 NAA25Q14CX7 972 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 C14orf28Q4W4Y0 310 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 SH2D4BQ5SQS7 431 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 ZCCHC8Q6NZY4 707 aaKnown RBP12.42□□□□□ -0.42
CLK3-214ENST00000564096 LCTLQ6UWM7 567 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 GPRIN3Q6ZVF9 776 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 THOC6Q86W42 341 aaKnown RBP12.42□□□□□ -0.42
CLK3-214ENST00000564096 AMIGO1Q86WK6 493 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 LRRC34Q8IZ02 419 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 PIWIL2Q8TC59 973 aaKnown RBP12.42□□□□□ -0.42
CLK3-214ENST00000564096 SLC22A18Q96BI1 424 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 PYCR2Q96C36 320 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 IL17FQ96PD4 163 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 ZNF317Q96PQ6 595 aaPredicted RBP12.42□□□□□ -0.42
CLK3-214ENST00000564096 GTPBP2Q9BX10 602 aaKnown RBP12.42□□□□□ -0.42
CLK3-214ENST00000564096 SGPP1Q9BX95 441 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 TRIM55Q9BYV6 548 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 NOL11Q9H8H0 719 aaKnown RBP12.42□□□□□ -0.42
CLK3-214ENST00000564096 IPPKQ9H8X2 491 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 ACTR8Q9H981 624 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 UCK1Q9HA47 277 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 SLC40A1Q9NP59 571 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 MID1IP1Q9NPA3 183 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 SLCO1B3Q9NPD5 702 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 UCKL1Q9NWZ5 548 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 ICKQ9UPZ9 632 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 ABCA7Q8IZY2 2146 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 LRRC14BA6NHZ5 514 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 LILRA5A6NI73 299 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 PATE3B3GLJ2 98 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 MATN2O00339 956 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 UGDHO60701 494 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 TGDSO95455 350 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 ESRRBO95718 433 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 CHRNGP07510 517 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 EBLN1P0CF75 366 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 GNAZP19086 355 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 MPSTP25325 297 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 GDF5P43026 501 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 RPL14P50914 215 aaKnown RBP12.41□□□□□ -0.42
CLK3-214ENST00000564096 CDH13P55290 713 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 MAZP56270 477 aaKnown RBP12.41□□□□□ -0.42
CLK3-214ENST00000564096 C18orf21Q32NC0 220 aaPredicted RBP12.41□□□□□ -0.42
CLK3-214ENST00000564096 ARMC6Q6NXE6 501 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 TMEM26Q6ZUK4 368 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 OOSP2Q86WS3 158 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 MYLK4Q86YV6 388 aaPredicted RBP12.41□□□□□ -0.42
CLK3-214ENST00000564096 KYQ8NBH2 561 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 PPFIBP2Q8ND30 876 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 OR6C4Q8NGE1 309 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 SAP25Q8TEE9 199 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 AGAP11Q8TF27 550 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 PATE1Q8WXA2 126 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 ESAMQ96AP7 390 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 NSUN5Q96P11 429 aaKnown RBP12.41□□□□□ -0.42
CLK3-214ENST00000564096 SORT1Q99523 831 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 SLC38A3Q99624 504 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 MENTQ9BUN1 341 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 KCNH6Q9H252 994 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 PFDN4Q9NQP4 134 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 ABCF3Q9NUQ8 709 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 VTI1BQ9UEU0 232 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 TRPS1Q9UHF7 1281 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 HAO1Q9UJM8 370 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 SLC22A14Q9Y267 594 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 ASB1Q9Y576 335 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 PCDHB11Q9Y5F2 797 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 ENTPD2Q9Y5L3 495 aa12.41□□□□□ -0.42
CLK3-214ENST00000564096 TRBV23OR9-2A0A075B6M9 112 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 RHPN2P1A8MT19 583 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 ITM2AO43736 263 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 PCDHGA12O60330 932 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 NOBOXO60393 691 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 FKBP9O95302 570 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 FAM107AO95990 144 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 ZNF883P0CG24 379 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 ENGP17813 658 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 SEC24CP53992 1094 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 EPHA4P54764 986 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 ABATP80404 500 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 KIR2DS3Q14952 304 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 SUZ12Q15022 739 aaKnown RBP12.4□□□□□ -0.42
CLK3-214ENST00000564096 SHBQ15464 509 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 GGTA1PQ4G0N0 100 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 PAGE2BQ5JRK9 111 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 OGFOD3Q6PK18 319 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 RPS27LQ71UM5 84 aaKnown RBP12.4□□□□□ -0.42
CLK3-214ENST00000564096 TMPRSS11BQ86T26 416 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 C17orf64Q86WR6 236 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 ARL14Q8N4G2 192 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 ZNF781Q8N8C0 355 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 PRSS33Q8NF86 280 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms