RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 LCTLQ6UWM7 567 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 LARP4Q71RC2 724 aaKnown RBP eCLIP13.85□□□□□ -0.199e-6■■■■□ 21.5
COMMD4-205ENST00000562310 RD3Q7Z3Z2 195 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 WDR5BQ86VZ2 330 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 LRRC56Q8IYG6 542 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-205ENST00000562310 CPSF7Q8N684 471 aaKnown RBP13.85□□□□□ -0.19
COMMD4-205ENST00000562310 SMPDL3AQ92484 453 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 HSPA12BQ96MM6 686 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 CDK15Q96Q40 435 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 FERD3LQ96RJ6 166 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 CCDC106Q9BWC9 280 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 DUSP15Q9H1R2 295 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-205ENST00000562310 TUBB1Q9H4B7 451 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 EHD1Q9H4M9 534 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 BTRCQ9Y297 605 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 WDR37Q9Y2I8 494 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 TIMM22Q9Y584 194 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 TP53BP1Q12888 1972 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-205ENST00000562310 KCNE1BA0A087WTH5 132 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 A0A1W2PR77 199 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 CAPN14A8MX76 684 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 SLC28A1O00337 649 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 MANBAO00462 879 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 UBDO15205 165 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 UNC5CO95185 931 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 JUPP14923 745 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 LBPP18428 481 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 PRDX6P30041 224 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 CASP2P42575 452 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 RASSF2P50749 326 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 RAB28P51157 221 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 EIF2B5Q13144 721 aaKnown RBP13.84□□□□□ -0.19
COMMD4-205ENST00000562310 CHIT1Q13231 466 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 E2F2Q14209 437 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 SQLEQ14534 574 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 PRAMEF14Q5SWL7 426 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 PRAMEF13Q5VWM6 474 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 GRHL2Q6ISB3 625 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 DUS1LQ6P1R4 473 aaKnown RBP13.84□□□□□ -0.19
COMMD4-205ENST00000562310 IL27RAQ6UWB1 636 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 CHSY3Q70JA7 882 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 SPATA19Q7Z5L4 167 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 MYLK4Q86YV6 388 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-205ENST00000562310 PHACTR4Q8IZ21 702 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 DCBLD1Q8N8Z6 715 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 HMGCLL1Q8TB92 370 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 GPBAR1Q8TDU6 330 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 TUBGCP3Q96CW5 907 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 WDR34Q96EX3 536 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 CAMK1GQ96NX5 476 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 EFCAB11Q9BUY7 163 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 TMEM168Q9H0V1 697 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 ZNF385DQ9H6B1 395 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 KIR3DX1Q9H7L2 352 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 PRDM8Q9NQV8 689 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 INTS7Q9NVH2 962 aaKnown RBP13.84□□□□□ -0.19
COMMD4-205ENST00000562310 TBC1D29Q9UFV1 150 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 INVSQ9Y283 1065 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 RNF11Q9Y3C5 154 aa13.84□□□□□ -0.19
COMMD4-205ENST00000562310 CFAP20Q9Y6A4 193 aaKnown RBP13.84□□□□□ -0.19
COMMD4-205ENST00000562310 SERTM1A2A2V5 107 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 A6NCN8 305 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 OR5K4A6NMS3 321 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 LAMTOR5O43504 91 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 RGS14O43566 566 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 ULK1O75385 1050 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 LINC00032P0C843 101 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 PRR35P0CG20 571 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 F3P13726 295 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 EZRP15311 586 aaKnown RBP13.83□□□□□ -0.2
COMMD4-205ENST00000562310 CALB2P22676 271 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 PKLRP30613 574 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 MNAT1P51948 309 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 STX1BP61266 288 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 LAPTM5Q13571 262 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 UBAP2LQ14157 1087 aaKnown RBP13.83□□□□□ -0.2
COMMD4-205ENST00000562310 CLCA4Q14CN2 919 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 HERC3Q15034 1050 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 SMU1Q2TAY7 513 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 ATP6AP1LQ52LC2 224 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 XKR6Q5GH73 641 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 PAGE2BQ5JRK9 111 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 TJAP1Q5JTD0 557 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 SLC30A9Q6PML9 568 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 PPFIBP2Q8ND30 876 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 OR2L8Q8NGY9 312 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 DNASE2BQ8WZ79 361 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 USP7Q93009 1102 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 REPS1Q96D71 796 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 CMTM5Q96DZ9 223 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 PTCD3Q96EY7 689 aaKnown RBP13.83□□□□□ -0.2
COMMD4-205ENST00000562310 PRR11Q96HE9 360 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-205ENST00000562310 NSL1Q96IY1 281 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 PPP3R2Q96LZ3 170 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 C3orf30Q96M34 536 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 CATSPER2Q96P56 530 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 OR4K3Q96R72 315 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 MENTQ9BUN1 341 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 ELOVL6Q9H5J4 265 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 AKTIPQ9H8T0 292 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms