RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 IGSF5Q9NSI5 407 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 STOX2Q9P2F5 926 aaPredicted RBP12.96□□□□□ -0.33
CDH1-204ENST00000562118 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.96□□□□□ -0.33
CDH1-204ENST00000562118 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 OARD1Q9Y530 152 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 V9GYY5 206 aaPredicted RBP12.96□□□□□ -0.33
CDH1-204ENST00000562118 A0A0J9YY10 115 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 EXOC1LA0A1B0GW35 172 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 ZNF839A8K0R7 811 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 C9orf172C9J069 976 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 BRINP1O60477 761 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 MPOP05164 745 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 INHBAP08476 426 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 CCDC166P0CW27 439 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 FGF5P12034 268 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 CCL4P13236 92 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 ST6GAL1P15907 406 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 CSTF2P33240 577 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDH1-204ENST00000562118 HSD17B3P37058 310 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 SERPINB8P50452 374 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 RAB15P59190 212 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 ATP6V0D1P61421 351 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 HSD11B2P80365 405 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 RELAQ04206 551 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 BMPR2Q13873 1038 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 FASTKQ14296 549 aaKnown RBP12.95□□□□□ -0.34
CDH1-204ENST00000562118 ZIC1Q15915 447 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 TBC1D25Q3MII6 688 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 C3orf38Q5JPI3 329 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 MROH9Q5TGP6 573 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 UNQ6494/PRO21346Q6UXR6 183 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 RAB42Q8N4Z0 105 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 OR56A3Q8NH54 315 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 SNIP1Q8TAD8 396 aaKnown RBP12.95□□□□□ -0.34
CDH1-204ENST00000562118 MCOLN3Q8TDD5 553 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 SMPDL3AQ92484 453 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 KIAA1191Q96A73 305 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 FBXL8Q96CD0 374 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 ZNF578Q96N58 590 aaPredicted RBP12.95□□□□□ -0.34
CDH1-204ENST00000562118 OCIAD1Q9NX40 245 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 LNPEPQ9UIQ6 1025 aa12.95□□□□□ -0.34
CDH1-204ENST00000562118 TPRP12270 2363 aaKnown RBP12.94□□□□□ -0.34
CDH1-204ENST00000562118 ACACAQ13085 2346 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 MAP1BP46821 2468 aaKnown RBP12.94□□□□□ -0.34
CDH1-204ENST00000562118 MDC1Q14676 2089 aaKnown RBP12.94□□□□□ -0.34
CDH1-204ENST00000562118 A0A087X1B8 175 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 IGKV1-8A0A0C4DH67 115 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 GSAPA4D1B5 854 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 TARM1B6A8C7 271 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 CDC7O00311 574 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 KRT38O76015 456 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 SHBGP04278 402 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 C2P06681 752 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 HGFP14210 728 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 ITIH1P19827 911 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 MAP4P27816 1152 aaKnown RBP12.94□□□□□ -0.34
CDH1-204ENST00000562118 OAS2P29728 719 aaKnown RBP12.94□□□□□ -0.34
CDH1-204ENST00000562118 GGT5P36269 586 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 MSH2P43246 934 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 SLC12A2P55011 1212 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 IL11RAQ14626 422 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 ZNF425Q6IV72 752 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 ARMC6Q6NXE6 501 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 ISCA2Q86U28 154 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 BPHLQ86WA6 291 aaPredicted RBP12.94□□□□□ -0.34
CDH1-204ENST00000562118 C19orf47Q8N9M1 422 aaKnown RBP12.94□□□□□ -0.34
CDH1-204ENST00000562118 PDPRQ8NCN5 879 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 OR2L3Q8NG85 312 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 RHEBL1Q8TAI7 183 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 PMEPA1Q969W9 287 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 PTERQ96BW5 349 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 MTBPQ96DY7 904 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 ZNF285Q96NJ3 590 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 FCRL4Q96PJ5 515 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 TEFMQ96QE5 360 aaKnown RBP12.94□□□□□ -0.34
CDH1-204ENST00000562118 TAAR9Q96RI9 348 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 ATOH8Q96SQ7 321 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 ZPBPQ9BS86 351 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 RRAGDQ9NQL2 400 aaPredicted RBP12.94□□□□□ -0.34
CDH1-204ENST00000562118 AKAP7Q9P0M2 348 aaPredicted RBP12.94□□□□□ -0.34
CDH1-204ENST00000562118 ANKMY1Q9P2S6 941 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 CIDEBQ9UHD4 219 aa12.94□□□□□ -0.34
CDH1-204ENST00000562118 TSR3Q9UJK0 312 aaKnown RBP12.94□□□□□ -0.34
CDH1-204ENST00000562118 AHCTF1Q8WYP5 2266 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 FER1L5A0AVI2 2057 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 OR2A25A4D2G3 310 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 NPEPPSL1A6NEC2 478 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 EFCAB7A8K855 629 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 C1QTNF9BB2RNN3 333 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 RFPL1O75677 317 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 KLHL2O95198 593 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 LTA4HP09960 611 aaKnown RBP12.93□□□□□ -0.34
CDH1-204ENST00000562118 C1QTNF9P0C862 333 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 COL6A2P12110 1019 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 FOLR1P15328 257 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 SAT1P21673 171 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 CD82P27701 267 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 GRIA3P42263 894 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 GCGRP47871 477 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 SLC6A12P48065 614 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms