RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 FASTKD1Q53R41 847 aaKnown RBP11.17□□□□□ -0.62
USP3-220ENST00000561381 FCRL6Q6DN72 434 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 TTLL10Q6ZVT0 673 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 SLC13A5Q86YT5 568 aaPredicted RBP11.17□□□□□ -0.62
USP3-220ENST00000561381 DCUN1D3Q8IWE4 304 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 SPC24Q8NBT2 197 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 CLEC1AQ8NC01 280 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 INPP5DQ92835 1189 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 PTERQ96BW5 349 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 IP6K3Q96PC2 410 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 TTC1Q99614 292 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 CARD6Q9BX69 1037 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 ASF1BQ9NVP2 202 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 C5AR2Q9P296 337 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 RIMKLBQ9ULI2 386 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 RUVBL2Q9Y230 463 aaKnown RBP11.17□□□□□ -0.62
USP3-220ENST00000561381 B3GNT3Q9Y2A9 372 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 CSAG2Q9Y5P2 127 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 DOCK10Q96BY6 2186 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 UTP20O75691 2785 aaKnown RBP11.16□□□□□ -0.62
USP3-220ENST00000561381 KDM1AO60341 852 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 NRP2O60462 931 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 SLCO2B1O94956 709 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 APOA4P06727 396 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 PSMB5P28074 263 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 RPL22P35268 128 aaKnown RBP11.16□□□□□ -0.62
USP3-220ENST00000561381 BDKRB1P46663 353 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 SESN2P58004 480 aaPredicted RBP11.16□□□□□ -0.62
USP3-220ENST00000561381 CYP2A13Q16696 494 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 CCSMST1Q4G0I0 132 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 SEL1L2Q5TEA6 688 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 FIGLAQ6QHK4 219 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 SHISA6Q6ZSJ9 500 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 COX15Q7KZN9 410 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 LURAP1LQ8IV03 231 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 IQCKQ8N0W5 287 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 METTL27Q8N6F8 245 aaPredicted RBP11.16□□□□□ -0.62
USP3-220ENST00000561381 OR2L8Q8NGY9 312 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 ASZ1Q8WWH4 475 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 SLC29A3Q9BZD2 475 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 CATSPERZQ9NTU4 200 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.16□□□□□ -0.62
USP3-220ENST00000561381 FBXL4Q9UKA2 621 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 NFS1Q9Y697 457 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 NBPF19A0A087WUL8 3843 aa11.16□□□□□ -0.62
USP3-220ENST00000561381 A0A1B0GX78 115 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 F8W8V4 182 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 AGPSO00116 658 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 PRMT5O14744 637 aaPredicted RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 RASGRF2O14827 1237 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 CD3EAPO15446 510 aaKnown RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 PRICKLE3O43900 615 aaPredicted RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 CTSVO60911 334 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 MED26O95402 600 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 CBX6O95503 412 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 S1PR4O95977 384 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 ALPPP05187 535 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 CD63P08962 238 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 NMBRP28336 390 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 OR1D4P47884 311 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 YBX1P67809 324 aaKnown RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 SIX1Q15475 284 aaPredicted RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 SF1Q15637 639 aaKnown RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 CRB2Q5IJ48 1285 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 AARS2Q5JTZ9 985 aaKnown RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 PTRHD1Q6GMV3 140 aaKnown RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 IGFL3Q6UXB1 125 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 UNC5DQ6UXZ4 953 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 NLRP9Q7RTR0 991 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 OVCH1Q7RTY7 1134 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 CUZD1Q86UP6 607 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 CCDC89Q8N998 374 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 PPHLN1Q8NEY8 458 aaKnown RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 DLG3Q92796 817 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 SLC22A18Q96BI1 424 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 SPSB2Q99619 263 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 MESP1Q9BRJ9 268 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 PRR14Q9BWN1 585 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 TSSK1BQ9BXA7 367 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 FRMD8P1Q9BZ68 369 aaPredicted RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 ILKAPQ9H0C8 392 aaPredicted RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 P2RY12Q9H244 342 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 SOX17Q9H6I2 414 aaPredicted RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 SLC6A20Q9NP91 592 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 ATP13A2Q9NQ11 1180 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 TREX1Q9NSU2 369 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 CUTCQ9NTM9 273 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 CUEDC1Q9NWM3 386 aaPredicted RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 PAK5Q9P286 719 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 STOX2Q9P2F5 926 aaPredicted RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 CTSFQ9UBX1 484 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 ERRFI1Q9UJM3 462 aaPredicted RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 CDC23Q9UJX2 597 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 SLC39A10Q9ULF5 831 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 TTC7AQ9ULT0 858 aaPredicted RBP11.15□□□□□ -0.62
USP3-220ENST00000561381 GUCA1BQ9UMX6 200 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 NTNG1Q9Y2I2 539 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 MAU2Q9Y6X3 613 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 CNTRLQ7Z7A1 2325 aa11.15□□□□□ -0.62
USP3-220ENST00000561381 PCM1Q15154 2024 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms