RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 MSANTD4Q8NCY6 345 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 OR4E2Q8NGC2 313 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 GPT2Q8TD30 523 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 FAM172AQ8WUF8 416 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 SLC20A1Q8WUM9 679 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 RNF141Q8WVD5 230 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 PIH1D2Q8WWB5 315 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 RXFP2Q8WXD0 754 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 HDAC10Q969S8 669 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 Q96MF0 132 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 NUDCD1Q96RS6 583 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 BDH2Q9BUT1 245 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 SPATA16Q9BXB7 569 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 SLC39A8Q9C0K1 460 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 SCAND2PQ9GZW5 306 aaPredicted RBP5.08□□□□□ -1.6
HERC1-213ENST00000561359 DEF6Q9H4E7 631 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 TRIM39Q9HCM9 518 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 METTL5Q9NRN9 209 aaKnown RBP5.08□□□□□ -1.6
HERC1-213ENST00000561359 IMP3Q9NV31 184 aaKnown RBP5.08□□□□□ -1.6
HERC1-213ENST00000561359 POMT2Q9UKY4 750 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 PCDHA7Q9UN72 937 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 PSMD13Q9UNM6 376 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 RNF6Q9Y252 685 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 POLR3KQ9Y2Y1 108 aaPredicted RBP5.08□□□□□ -1.6
HERC1-213ENST00000561359 L3MBTL1Q9Y468 752 aa5.08□□□□□ -1.6
HERC1-213ENST00000561359 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.07□□□□□ -1.63e-14■□□□□ 8.3
HERC1-213ENST00000561359 A0A0J9YYE9 177 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 C1orf232A0A0U1RR37 186 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 OR5H15A6NDH6 313 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 A6NNC1 897 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 MAP2K7O14733 419 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 ZSCAN9O15535 394 aaPredicted RBP5.07□□□□□ -1.6
HERC1-213ENST00000561359 KCNAB3O43448 404 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 MTX2O75431 263 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 CDK14O94921 469 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 TRBC1P01850 177 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 ESR1P03372 595 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 PDHA1P08559 390 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 PVRP15151 417 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 HLA-DPA1P20036 260 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 ITGAXP20702 1163 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 FDXRP22570 491 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 HSPA9P38646 679 aaKnown RBP5.07□□□□□ -1.6
HERC1-213ENST00000561359 SPINT3P49223 89 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 DLX5P56178 289 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 MAXP61244 160 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 DCAF7P61962 342 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 EGR3Q06889 387 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 IL10RBQ08334 325 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 SLC10A7Q0GE19 358 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 XRCC4Q13426 336 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 KRT33BQ14525 404 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 ZNF124Q15973 351 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 CLEC16AQ2KHT3 1053 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 DEFB110Q30KQ9 67 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 TFDP3Q5H9I0 405 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 ABHD17BQ5VST6 288 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 ALS2CLQ60I27 953 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 HIBCHQ6NVY1 386 aaPredicted RBP5.07□□□□□ -1.6
HERC1-213ENST00000561359 TTI2Q6NXR4 508 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 ARSKQ6UWY0 536 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 CDHR3Q6ZTQ4 885 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 ARCQ7LC44 396 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 STRADAQ7RTN6 431 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 HOOK3Q86VS8 718 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 ZNF547Q8IVP9 402 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 ULK2Q8IYT8 1036 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 BBS5Q8N3I7 341 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 MARVELD2Q8N4S9 558 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 CCHCR1Q8TD31 782 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 PSMF1Q92530 271 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 NTAN1Q96AB6 310 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 SEC16BQ96JE7 1060 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 WDR24Q96S15 920 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 MENTQ9BUN1 341 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 NAA15Q9BXJ9 866 aaKnown RBP5.07□□□□□ -1.6
HERC1-213ENST00000561359 SPRTNQ9H040 489 aaPredicted RBP5.07□□□□□ -1.6
HERC1-213ENST00000561359 DMRT3Q9NQL9 472 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 KLHL1Q9NR64 748 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 FANCLQ9NW38 375 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 BEX4Q9NWD9 120 aaPredicted RBP5.07□□□□□ -1.6
HERC1-213ENST00000561359 DTLQ9NZJ0 730 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 PKD2L2Q9NZM6 624 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 DNPEPQ9ULA0 475 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 PPIL1Q9Y3C6 166 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 PCM1Q15154 2024 aa5.07□□□□□ -1.6
HERC1-213ENST00000561359 NSG1A0A0A6YYJ2 146 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 A0A1B0GVL5 298 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 ZNF503-AS2A6NEH8 195 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 USP27XA6NNY8 438 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 MATN2O00339 956 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 PHF1O43189 567 aaPredicted RBP5.06□□□□□ -1.6
HERC1-213ENST00000561359 DAPK3O43293 454 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 SPRY1O43609 319 aaPredicted RBP5.06□□□□□ -1.6
HERC1-213ENST00000561359 BMP10O95393 424 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 SERPINA7P05543 415 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 PIM1P11309 404 aaPredicted RBP5.06□□□□□ -1.6
HERC1-213ENST00000561359 MTHFD1P11586 935 aaKnown RBP5.06□□□□□ -1.6
HERC1-213ENST00000561359 CYP11B1P15538 503 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 VAMP1P23763 118 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms