RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 KIR2DS3K7RE56 304 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 ULK1O75385 1050 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 SKAP2O75563 359 aaPredicted RBP9.99□□□□□ -0.81
USP3-219ENST00000561326 SNRNP200O75643 2136 aaKnown RBP9.99□□□□□ -0.81
USP3-219ENST00000561326 CAPN1P07384 714 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 SERPINA6P08185 405 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 TDGF1P13385 188 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 NME1P15531 152 aaKnown RBP9.99□□□□□ -0.81
USP3-219ENST00000561326 NCF2P19878 526 aaPredicted RBP9.99□□□□□ -0.81
USP3-219ENST00000561326 ITPKAP23677 461 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 SERPINB3P29508 390 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 HNF4AP41235 474 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 DPP6P42658 865 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 CSNK1EP49674 416 aaKnown RBP9.99□□□□□ -0.81
USP3-219ENST00000561326 INHBCP55103 352 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 ERVPABLB-1P60509 514 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 IRF8Q02556 426 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 BTKQ06187 659 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 ZNF33BQ06732 778 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 PCDH1Q08174 1060 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 TSTA3Q13630 321 aaPredicted RBP9.99□□□□□ -0.81
USP3-219ENST00000561326 KIR2DS5Q14953 304 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 CYP2A13Q16696 494 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 UGT3A2Q3SY77 523 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 PRRT3Q5FWE3 981 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 IYDQ6PHW0 289 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 CEP68Q76N32 757 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 BMP8AQ7Z5Y6 402 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 MTDHQ86UE4 582 aaKnown RBP9.99□□□□□ -0.81
USP3-219ENST00000561326 GKN2Q86XP6 184 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 MYLK4Q86YV6 388 aaPredicted RBP9.99□□□□□ -0.81
USP3-219ENST00000561326 FBXL6Q8N531 539 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 CDYL2Q8N8U2 506 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 OR52B6Q8NGF0 335 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 C1orf216Q8TAB5 229 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 ACTRT2Q8TDY3 377 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 TWIST2Q8WVJ9 160 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 C19orf60Q96EN9 201 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 EBF4Q9BQW3 602 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 SGPP1Q9BX95 441 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 RIC8BQ9NVN3 520 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 TAAR2Q9P1P5 351 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 SPASTQ9UBP0 616 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 ZFP69BQ9UJL9 534 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 DNAJC15Q9Y5T4 150 aa9.99□□□□□ -0.81
USP3-219ENST00000561326 OR52A4PA6NMU1 304 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 E7ENX8 843 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 SLC28A1O00337 649 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 VIPP01282 170 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 WNT1P04628 370 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 NPPBP16860 134 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 XRCC1P18887 633 aaPredicted RBP9.98□□□□□ -0.81
USP3-219ENST00000561326 PRDX3P30048 256 aaKnown RBP9.98□□□□□ -0.81
USP3-219ENST00000561326 SHMT2P34897 504 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 CASP2P42575 452 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 RAB28P51157 221 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 NXPH1P58417 271 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 TBPL1P62380 186 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 IRX1P78414 480 aaPredicted RBP9.98□□□□□ -0.81
USP3-219ENST00000561326 TAP2Q03519 686 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 TRAF3Q13114 568 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 CHIT1Q13231 466 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 LAPTM5Q13571 262 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 TBCCQ15814 346 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 HIST2H2ACQ16777 129 aaPredicted RBP9.98□□□□□ -0.81
USP3-219ENST00000561326 ZXDCQ2QGD7 858 aaPredicted RBP9.98□□□□□ -0.81
USP3-219ENST00000561326 ZNF528Q3MIS6 628 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 GGTA1PQ4G0N0 100 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 SLC9B1Q4ZJI4 515 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 ZNF542PQ5EBM4 170 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 XKR6Q5GH73 641 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 PAGE2BQ5JRK9 111 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 SPDYAQ5MJ70 313 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 VWA5B1Q5TIE3 1220 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 PMS2CLQ68D20 193 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 HIST2H2AA3Q6FI13 130 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 LETMD1Q6P1Q0 360 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 LCTLQ6UWM7 567 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 ARMCX6Q7L4S7 300 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 MAVSQ7Z434 540 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 RABEPKQ7Z6M1 372 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 C17orf64Q86WR6 236 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 NRROSQ86YC3 692 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 RBM12BQ8IXT5 1001 aaKnown RBP9.98□□□□□ -0.81
USP3-219ENST00000561326 TMEM105Q8N8V8 129 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 L3MBTL4Q8NA19 623 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 FAM46DQ8NEK8 389 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 OR2L8Q8NGY9 312 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 CCL4L1Q8NHW4 92 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 HMGCLL1Q8TB92 370 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 MAPK15Q8TD08 544 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 LCN9Q8WX39 176 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 REPS1Q96D71 796 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 PPP1R36Q96LQ0 422 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 CDK15Q96Q40 435 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 WDR55Q9H6Y2 383 aaPredicted RBP9.98□□□□□ -0.81
USP3-219ENST00000561326 KIR3DX1Q9H7L2 352 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 ERVMER34-1Q9H9K5 563 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 TNFRSF12AQ9NP84 129 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 ABCF3Q9NUQ8 709 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms