RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 OLFM1Q99784 485 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 WDR83Q9BRX9 315 aaKnown RBP10.36□□□□□ -0.75
TPM1-229ENST00000561242 NDC1Q9BTX1 674 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 ACAT2Q9BWD1 397 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 SNX15Q9NRS6 342 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 TXLNGQ9NUQ3 528 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 GALPQ9UBC7 116 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 GPN3Q9UHW5 284 aaPredicted RBP10.36□□□□□ -0.75
TPM1-229ENST00000561242 ICKQ9UPZ9 632 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 CDYLQ9Y232 598 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 OARD1Q9Y530 152 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 TNPO3Q9Y5L0 923 aaKnown RBP10.36□□□□□ -0.75
TPM1-229ENST00000561242 GPR179Q6PRD1 2367 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 ARHGEF33A8MVX0 844 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 TARM1B6A8C7 271 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 E7EQ34 232 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 GFYI3L273 518 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 MYO1CO00159 1063 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 BTN3A3O00478 584 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 KLHL2O95198 593 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 C9P02748 559 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 EIF2S1P05198 315 aaKnown RBP10.35□□□□□ -0.75
TPM1-229ENST00000561242 CD63P08962 238 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 UGT2B7P16662 529 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 NELFEP18615 380 aaKnown RBP10.35□□□□□ -0.75
TPM1-229ENST00000561242 HSD17B3P37058 310 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 PIK3CGP48736 1102 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 GFERP55789 205 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 ERVPABLB-1P60509 514 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 SKP1P63208 163 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 PHEXP78562 749 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 SHC2P98077 582 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 CYP4F3Q08477 520 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 ASPHQ12797 758 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 ZNF460Q14592 562 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 NDUFA9Q16795 377 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 TCTE1Q5JU00 501 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 PRAMEF13Q5VWM6 474 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 ADGRD1Q6QNK2 874 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 CYHR1Q6ZMK1 362 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 KRT78Q8N1N4 520 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 IL22RA1Q8N6P7 574 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 LRRN4CLQ8ND94 238 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 ACMSDQ8TDX5 336 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 DLG3Q92796 817 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 FGF11Q92914 225 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 USP7Q93009 1102 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 CAVIN3Q969G5 261 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 KIAA1191Q96A73 305 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 IL17FQ96PD4 163 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 SMC6Q96SB8 1091 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 C17orf62Q9BQA9 187 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 FUT8Q9BYC5 575 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 DRC3Q9H069 523 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 ATG10Q9H0Y0 220 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 ZNF768Q9H5H4 540 aaKnown RBP10.35□□□□□ -0.75
TPM1-229ENST00000561242 ALG9Q9H6U8 611 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 ANKMY1Q9P2S6 941 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 POMT2Q9UKY4 750 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 PLCL2Q9UPR0 1127 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 PDE10AQ9Y233 779 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 AP1M2Q9Y6Q5 423 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 PCDH15Q96QU1 1955 aa10.35□□□□□ -0.75
TPM1-229ENST00000561242 MN1Q10571 1320 aaPredicted RBP10.34□□□□□ -0.75
TPM1-229ENST00000561242 URADA6NGE7 173 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 COPEO14579 308 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 CCNT2O60583 730 aaKnown RBP10.34□□□□□ -0.75
TPM1-229ENST00000561242 KATNA1O75449 491 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 DKK1O94907 266 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 WDR47O94967 919 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 SLC16A8O95907 504 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 GNAZP19086 355 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 CCR8P51685 355 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 ARSFP54793 590 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 ITGA1P56199 1179 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 CLDN6P56747 220 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 PCBP4P57723 403 aaKnown RBP10.34□□□□□ -0.75
TPM1-229ENST00000561242 CDKL1Q00532 357 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 MC2RQ01718 297 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 GBX1Q14549 363 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 TSNQ15631 228 aaKnown RBP10.34□□□□□ -0.75
TPM1-229ENST00000561242 FAM214AQ32MH5 1076 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 KRT71Q3SY84 523 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 PAGE2BQ5JRK9 111 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 CDKL4Q5MAI5 379 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 FIGLAQ6QHK4 219 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 SUSD1Q6UWL2 747 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 CMC1Q7Z7K0 106 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 B3GNT8Q7Z7M8 397 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 CEP97Q8IW35 865 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 SLITRK4Q8IW52 837 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 ADGRF3Q8IZF5 1079 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 C19orf47Q8N9M1 422 aaKnown RBP10.34□□□□□ -0.75
TPM1-229ENST00000561242 ZNF248Q8NDW4 579 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 KLHL6Q8WZ60 621 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 UBE2E3Q969T4 207 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 FBXL8Q96CD0 374 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 PKNOX2Q96KN3 472 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 FCRL4Q96PJ5 515 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 SLC30A3Q99726 388 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms