RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 CBSLP0DN79 551 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 CBSP35520 551 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 GCGRP47871 477 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 FOXL2P58012 376 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 KCNC4Q03721 635 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 GBX1Q14549 363 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 MORF4L2Q15014 288 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 LONRF1Q17RB8 773 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 ANKRD20A4Q4UJ75 823 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 TCTN3Q6NUS6 607 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 KLHL7Q8IXQ5 586 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 AGGF1Q8N302 714 aaeCLIP15.37■□□□□ 0.05
LMX1B-204ENST00000561065 DNAJC22Q8N4W6 341 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 NAT8LQ8N9F0 302 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 THAP4Q8WY91 577 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 GBP5Q96PP8 586 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 SERTAD3Q9UJW9 196 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 ANAPC2Q9UJX6 822 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 COMMD10Q9Y6G5 202 aa15.37■□□□□ 0.05
LMX1B-204ENST00000561065 ANKRD12Q6UB98 2062 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 NRP2O60462 931 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 CNOT3O75175 753 aaKnown RBP15.36■□□□□ 0.05
LMX1B-204ENST00000561065 OR2B3O76000 313 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 CHRM3P20309 590 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 CD9P21926 228 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 PSMB5P28074 263 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 ETF1P62495 437 aaKnown RBP15.36■□□□□ 0.05
LMX1B-204ENST00000561065 TTLL9Q3SXZ7 439 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 C1orf189Q5VU69 101 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 RHBDD2Q6NTF9 364 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 ZBTB2Q8N680 514 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 ZNF655Q8N720 491 aaPredicted RBP15.36■□□□□ 0.05
LMX1B-204ENST00000561065 OR2L8Q8NGY9 312 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 DENND1AQ8TEH3 1009 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 SKA2Q8WVK7 121 aaPredicted RBP15.36■□□□□ 0.05
LMX1B-204ENST00000561065 SEC14L1Q92503 715 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 SLC22A18Q96BI1 424 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 ZNF669Q96BR6 464 aaPredicted RBP15.36■□□□□ 0.05
LMX1B-204ENST00000561065 FAM136AQ96C01 138 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 LRRC39Q96DD0 335 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 RAB11FIP5Q9BXF6 653 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 GALPQ9UBC7 116 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 DHCR7Q9UBM7 475 aaKnown RBP15.36■□□□□ 0.05
LMX1B-204ENST00000561065 TSR3Q9UJK0 312 aaKnown RBP15.36■□□□□ 0.05
LMX1B-204ENST00000561065 PTPN13Q12923 2485 aa15.36■□□□□ 0.05
LMX1B-204ENST00000561065 HECTD1Q9ULT8 2610 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 RASGRF2O14827 1237 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 ZSCAN9O15535 394 aaPredicted RBP15.35■□□□□ 0.05
LMX1B-204ENST00000561065 PRICKLE3O43900 615 aaPredicted RBP15.35■□□□□ 0.05
LMX1B-204ENST00000561065 KLF7O75840 302 aaPredicted RBP15.35■□□□□ 0.05
LMX1B-204ENST00000561065 C1orf105O95561 183 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 PGAM1P18669 254 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 ITGAXP20702 1163 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 FMO4P31512 558 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 CCNFP41002 786 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 SLC9A5Q14940 896 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 IGFBP7Q16270 282 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 RNASEH2BQ5TBB1 312 aaKnown RBP15.35■□□□□ 0.05
LMX1B-204ENST00000561065 FCRL6Q6DN72 434 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 CNSTQ6PJW8 725 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 ASB18Q6ZVZ8 466 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 CENPUQ71F23 418 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 CILP2Q8IUL8 1156 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 GPR135Q8IZ08 494 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.35■□□□□ 0.05
LMX1B-204ENST00000561065 FAM167BQ9BTA0 163 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 SLC7A5P2Q9GIP4 190 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 C20orf96Q9NUD7 363 aaPredicted RBP15.35■□□□□ 0.05
LMX1B-204ENST00000561065 KLHL42Q9P2K6 505 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.35■□□□□ 0.05
LMX1B-204ENST00000561065 FAM169AQ9Y6X4 670 aa15.35■□□□□ 0.05
LMX1B-204ENST00000561065 TUBB4AP04350 444 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 ATXN8OSP0DMR3 200 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 MAGEA3P43357 314 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 FOXK1P85037 733 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 ILF2Q12905 390 aaKnown RBP15.34■□□□□ 0.05
LMX1B-204ENST00000561065 KLRB1Q12918 225 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 ATP1A4Q13733 1029 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.34■□□□□ 0.05
LMX1B-204ENST00000561065 UGT3A1Q6NUS8 523 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 N4BP2L2Q92802 583 aaPredicted RBP15.34■□□□□ 0.05
LMX1B-204ENST00000561065 RAD51AP1Q96B01 352 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 SNF8Q96H20 258 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 SIGLEC10Q96LC7 697 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 SLC30A3Q99726 388 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 DPH2Q9BQC3 489 aaPredicted RBP15.34■□□□□ 0.05
LMX1B-204ENST00000561065 ING2Q9H160 280 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 MLXIPLQ9NP71 852 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 SLC22A11Q9NSA0 550 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 EURLQ9NYK6 297 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 SLC39A10Q9ULF5 831 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 PLCL2Q9UPR0 1127 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 CRYL1Q9Y2S2 319 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 MED16Q9Y2X0 877 aa15.34■□□□□ 0.05
LMX1B-204ENST00000561065 HEATR5BQ9P2D3 2071 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 ZCWPW2A0A1B0GU75 182 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 A0A1W2PPV9 198 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 C9J4A7 227 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 CEACAM4O75871 244 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 S1PR4O95977 384 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms