RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 APOBEC3GQ9HC16 384 aaKnown RBP3.67□□□□□ -1.82
HERC1-211ENST00000560983 KLC4Q9NSK0 619 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 OLAHQ9NV23 265 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 VPS51Q9UID3 782 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 LNPEPQ9UIQ6 1025 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 VPS28Q9UK41 221 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 SLC45A2Q9UMX9 530 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 PLEKHA6Q9Y2H5 1048 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.67□□□□□ -1.82
HERC1-211ENST00000560983 CYP46A1Q9Y6A2 500 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 TCHHQ07283 1943 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 NBEAL2Q6ZNJ1 2754 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 TRRAPQ9Y4A5 3859 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 A0A0D9SEW6 157 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 LINC01548A6NM66 108 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 XPO1O14980 1071 aaKnown RBP3.66□□□□□ -1.82
HERC1-211ENST00000560983 EIF3DO15371 548 aaKnown RBP eCLIP3.66□□□□□ -1.82
HERC1-211ENST00000560983 CREB3O43889 395 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 CTAG2O75638 210 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 ZMPSTE24O75844 475 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 EML2O95834 649 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 MOCS2O96007 188 aaPredicted RBP3.66□□□□□ -1.82
HERC1-211ENST00000560983 ASS1P00966 412 aaKnown RBP3.66□□□□□ -1.82
HERC1-211ENST00000560983 C9P02748 559 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 ALPPP05187 535 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 CD1AP06126 327 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 CAPN1P07384 714 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 MST1P26927 711 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 TRIM23P36406 574 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 CCNHP51946 323 aaPredicted RBP3.66□□□□□ -1.82
HERC1-211ENST00000560983 SMSP52788 366 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 KIAA1024LP59773 190 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 KRT83P78385 493 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 PIGFQ07326 219 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 TFF3Q07654 80 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 ADIGQ0VDE8 80 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 CDC16Q13042 620 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 ATP1A4Q13733 1029 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 TRIM29Q14134 588 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 C3AR1Q16581 482 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 KYNUQ16719 465 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 ME3Q16798 604 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 C3orf36Q3SXR2 165 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 TMEM52BQ4KMG9 183 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 ARHGAP17Q68EM7 881 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 FCRL6Q6DN72 434 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 FAAH2Q6GMR7 532 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 HMBOX1Q6NT76 420 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 RPUSD3Q6P087 351 aaKnown RBP3.66□□□□□ -1.82
HERC1-211ENST00000560983 C22orf39Q6P5X5 142 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 SLC30A9Q6PML9 568 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 TMEM207Q6UWW9 146 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 GFRALQ6UXV0 394 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 TMEM200AQ86VY9 491 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 PDSS2Q86YH6 399 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 PELI3Q8N2H9 469 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 GALNT16Q8N428 558 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 FAM109AQ8N4B1 249 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 BCORP1Q8N888 145 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 OR10G6Q8NH81 332 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 DNAJB14Q8TBM8 379 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 DQX1Q8TE96 717 aaKnown RBP3.66□□□□□ -1.82
HERC1-211ENST00000560983 RFKQ969G6 155 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 RAB24Q969Q5 203 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 HDAC10Q969S8 669 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 CDK5RAP3Q96JB5 506 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 C9orf72Q96LT7 481 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 OSBPL9Q96SU4 736 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 WDR77Q9BQA1 342 aaPredicted RBP3.66□□□□□ -1.82
HERC1-211ENST00000560983 WRAP53Q9BUR4 548 aaKnown RBP3.66□□□□□ -1.82
HERC1-211ENST00000560983 PACSIN1Q9BY11 444 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 TM6SF1Q9BZW5 370 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 CHST8Q9H2A9 424 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 LRRC4Q9HBW1 653 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 CNGB3Q9NQW8 809 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 OLFML3Q9NRN5 406 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 PDRG1Q9NUG6 133 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 TRNAU1APQ9NX07 287 aaKnown RBP3.66□□□□□ -1.82
HERC1-211ENST00000560983 ETAA1Q9NY74 926 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 LIMCH1Q9UPQ0 1083 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 BTRCQ9Y297 605 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 TMA7Q9Y2S6 64 aaKnown RBP3.66□□□□□ -1.82
HERC1-211ENST00000560983 PRKAB1Q9Y478 270 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 PCDHA13Q9Y5I0 950 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 TGP01266 2768 aa3.66□□□□□ -1.82
HERC1-211ENST00000560983 BIRC6Q9NR09 4857 aa3.65□□□□□ -1.82
HERC1-211ENST00000560983 TRIM49BA6NDI0 452 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 LRRIQ3A6PVS8 624 aaPredicted RBP3.65□□□□□ -1.83
HERC1-211ENST00000560983 RASA4BC9J798 803 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 F5H5T6 163 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 CACNB4O00305 520 aaPredicted RBP3.65□□□□□ -1.83
HERC1-211ENST00000560983 RASA4O43374 803 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 UNC5CO95185 931 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 IGLV3-25P01717 112 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 RPN1P04843 607 aaKnown RBP3.65□□□□□ -1.83
HERC1-211ENST00000560983 PCCBP05166 539 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 CHRM2P08172 466 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 RAB40ALP0C0E4 278 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 P4HA1P13674 534 aa3.65□□□□□ -1.83
HERC1-211ENST00000560983 GAP43P17677 238 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms