RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 TOP3BO95985 862 aaKnown RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 TPBGLP0DKB5 382 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 F3P13726 295 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 ITGB6P18564 788 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 AK4P27144 223 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 NDUFS1P28331 727 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 EPHA8P29322 1005 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 RPA3P35244 121 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 MPLP40238 635 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 FASLGP48023 281 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 PREPP48147 710 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 ARRB1P49407 418 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 AP1S2P56377 157 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 DNAJB13P59910 316 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 PPP2R2AP63151 447 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 IRX4P78413 519 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 GPS2Q13227 327 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 E2F2Q14209 437 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 CSHL1Q14406 222 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 KIR2DS5Q14953 304 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 NR1D2Q14995 579 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 ARHGAP19Q14CB8 494 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 CLCA4Q14CN2 919 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 PLCL1Q15111 1095 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 OR4D1Q15615 310 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 TSNQ15631 228 aaKnown RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 RPE65Q16518 533 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 CYP2A13Q16696 494 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 ZXDCQ2QGD7 858 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 HLA-BQ31612 363 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 CCDC153Q494R4 210 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 ZNF542PQ5EBM4 170 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 N4BP2L1Q5TBK1 243 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 NAPRTQ6XQN6 538 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 RAPH1Q70E73 1250 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 CHST15Q7LFX5 561 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 ZNF438Q7Z4V0 828 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 RBM12BQ8IXT5 1001 aaKnown RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 TBC1D21Q8IYX1 336 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 NAGSQ8N159 534 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 MYO1HQ8N1T3 1032 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 AVL9Q8NBF6 648 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 PDPRQ8NCN5 879 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 ZNF548Q8NEK5 533 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 GPR156Q8NFN8 814 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 OR5K2Q8NHB8 316 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 HMGCLL1Q8TB92 370 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 TCP10LQ8TDR4 215 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 UBTD2Q8WUN7 234 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 TFGQ92734 400 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 SLC13A1Q9BZW2 595 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 VPS11Q9H270 941 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 MRPL46Q9H2W6 279 aaKnown RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 KIR3DX1Q9H7L2 352 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 MVB12BQ9H7P6 319 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 CAAP1Q9H8G2 361 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 SARS2Q9NP81 518 aaKnown RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 PRDM8Q9NQV8 689 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 DNAJC28Q9NX36 388 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 TAAR2Q9P1P5 351 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 SIRPGQ9P1W8 387 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 ZNF624Q9P2J8 865 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 APOBEC3BQ9UH17 382 aaKnown RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 PTBP2Q9UKA9 531 aaKnown RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 ADAMTS6Q9UKP5 1117 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 TMCO1Q9UM00 188 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 RUVBL2Q9Y230 463 aaKnown RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 PDE10AQ9Y233 779 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 KCNK6Q9Y257 313 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 OARD1Q9Y530 152 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 HEBP2Q9Y5Z4 205 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 PCDH15Q96QU1 1955 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 CEP250Q9BV73 2442 aa5.32□□□□□ -1.56
ZEB1-220ENST00000560909 ARHGEF17Q96PE2 2063 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-220ENST00000560909 NEMP2A6NFY4 417 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 SYCE1LA8MT33 242 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 PATE3B3GLJ2 98 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 STX16-NPEPL1H3BU86 382 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 CDX4O14627 284 aaPredicted RBP5.31□□□□□ -1.56
ZEB1-220ENST00000560909 STX16O14662 325 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 KLF11O14901 512 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 PRICKLE3O43900 615 aaPredicted RBP5.31□□□□□ -1.56
ZEB1-220ENST00000560909 DLX3O60479 287 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 SPAG7O75391 227 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 CATP04040 527 aaKnown RBP5.31□□□□□ -1.56
ZEB1-220ENST00000560909 F13BP05160 661 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 BPGMP07738 259 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 SYPP08247 313 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 SLC35G4P0C7Q5 338 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 MTHFD1P11586 935 aaKnown RBP5.31□□□□□ -1.56
ZEB1-220ENST00000560909 SLC2A4P14672 509 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 TFEBP19484 476 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 SAT1P21673 171 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 ATP5F1P24539 256 aaPredicted RBP5.31□□□□□ -1.56
ZEB1-220ENST00000560909 HSD17B2P37059 387 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 ACTR1BP42025 376 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 SLC6A12P48065 614 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 SERPINB4P48594 390 aa5.31□□□□□ -1.56
ZEB1-220ENST00000560909 HNMTP50135 292 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms