RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SPATA7Q9P0W8 599 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 IGSF10Q6WRI0 2623 aa12.5□□□□□ -0.41
CTDSPL2-209ENST00000560620 PABPN1LA6NDY0 278 aaKnown RBP12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 ARHGEF33A8MVX0 844 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 C21orf140B9A014 251 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 TK2O00142 265 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 MEN1O00255 615 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 ZBTB14O43829 449 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 PSIP1O75475 530 aaKnown RBP12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 AHSGP02765 367 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 HBQ1P09105 142 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 FAM87AP0C7U9 286 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 MSL3P1P0C860 447 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 CBSLP0DN79 551 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 SAT1P21673 171 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 F8A1P23610 371 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 RPA3P35244 121 aaPredicted RBP12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 CBSP35520 551 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 SKIV2L2P42285 1042 aaKnown RBP12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 GPS2Q13227 327 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 PDAP1Q13442 181 aaKnown RBP12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 COL9A2Q14055 689 aaPredicted RBP12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 FASTKD3Q14CZ7 662 aaKnown RBP12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 TBR1Q16650 682 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 DEFB109BQ30KR1 87 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 TEDDM1Q5T9Z0 273 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 ATP1A1-AS1Q5TC04 95 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 TRMT10BQ6PF06 316 aaKnown RBP12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 BORAQ6PGQ7 559 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 SUSD1Q6UWL2 747 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 NEK10Q6ZWH5 1172 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 UBE2R2Q712K3 238 aaPredicted RBP12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 PIWIL4Q7Z3Z4 852 aaKnown RBP12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 SPNS2Q8IVW8 549 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 SYTL1Q8IYJ3 562 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 MYO1HQ8N1T3 1032 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 SLC38A9Q8NBW4 561 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 PYROXD1Q8WU10 500 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 WBP1Q96G27 269 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 CATSPER2Q96P56 530 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 TWSG1Q9GZX9 223 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 ACTL8Q9H568 366 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 AKIRIN1Q9H9L7 192 aaPredicted RBP12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 SAYSD1Q9NPB0 183 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 TXLNGQ9NUQ3 528 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 WHRNQ9P202 907 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 KLHL42Q9P2K6 505 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 PLCL2Q9UPR0 1127 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 MED16Q9Y2X0 877 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 CACNA1GO43497 2377 aa12.49□□□□□ -0.41
CTDSPL2-209ENST00000560620 ATMQ13315 3056 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 CDC14CA4D256 554 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 ZNF839A8K0R7 811 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 ZSCAN9O15535 394 aaPredicted RBP12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 CREG1O75629 220 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 MPC1LP0DKB6 136 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 AGXTP21549 392 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 CMPK1P30085 196 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 CCR10P46092 362 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 MGAT5Q09328 741 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 FASTKQ14296 549 aaKnown RBP12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 PTCHD3Q3KNS1 767 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 ZC3H12BQ5HYM0 836 aaKnown RBP12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 RBM20Q5T481 1227 aaKnown RBP12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 THEMIS2Q5TEJ8 643 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 C1orf189Q5VU69 101 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 STEAP4Q687X5 459 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 LRRC8EQ6NSJ5 796 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 FIGLAQ6QHK4 219 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 PCSK4Q6UW60 755 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 CCDC25Q86WR0 208 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 CNTN4Q8IWV2 1026 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 ZNF655Q8N720 491 aaPredicted RBP12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 DENND1AQ8TEH3 1009 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 EEF1AKMT1Q8WVE0 214 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 SMPDL3AQ92484 453 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 RUFY1Q96T51 708 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 PKP4Q99569 1192 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 WDR83Q9BRX9 315 aaKnown RBP12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 NDC1Q9BTX1 674 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 GPR87Q9BY21 358 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 SPRTNQ9H040 489 aaPredicted RBP12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 CHST8Q9H2A9 424 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 TXNDC16Q9P2K2 825 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 AP1M2Q9Y6Q5 423 aa12.48□□□□□ -0.41
CTDSPL2-209ENST00000560620 C9J4A7 227 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 MYO1CO00159 1063 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 HCRTR1O43613 425 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 SLC16A8O95907 504 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 ALAS2P22557 587 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 GABRB3P28472 473 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 PTPN4P29074 926 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 HSD17B2P37059 387 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 PNLIPRP1P54315 467 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 PLTPP55058 493 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 CDKN2DP55273 166 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 RPS18P62269 152 aaKnown RBP12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 C19orf57Q0VDD7 668 aa12.47□□□□□ -0.41
CTDSPL2-209ENST00000560620 ARHGAP19Q14CB8 494 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms