RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CR1P17927 2039 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 NSG1A0A0A6YYJ2 146 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 PDZK1P1A8MUH7 402 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 EIF3CLB5ME19 914 aaKnown RBP6.1□□□□□ -1.43
HERC1-208ENST00000560462 UBFD1O14562 309 aaKnown RBP6.1□□□□□ -1.43
HERC1-208ENST00000560462 MAPK13O15264 365 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 CDC40O60508 579 aaKnown RBP eCLIP6.1□□□□□ -1.43
HERC1-208ENST00000560462 EXOC3O60645 756 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 ZNF205O95201 554 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 GLI4P10075 376 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 ENDOUP21128 410 aaKnown RBP6.1□□□□□ -1.43
HERC1-208ENST00000560462 GRK2P25098 689 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 ACVR2AP27037 513 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 TPP2P29144 1249 aaPredicted RBP6.1□□□□□ -1.43
HERC1-208ENST00000560462 GRK3P35626 688 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 NSG1P42857 185 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 CASP9P55211 416 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 YWHAZP63104 245 aaKnown RBP6.1□□□□□ -1.43
HERC1-208ENST00000560462 CDK17Q00537 523 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 TERF2Q15554 542 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 CLEC16AQ2KHT3 1053 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 TFDP3Q5H9I0 405 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 PGM2L1Q6PCE3 622 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 B3GNT6Q6ZMB0 384 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 IL17RELQ6ZVW7 336 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 NEK10Q6ZWH5 1172 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 OTOAQ7RTW8 1153 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.1□□□□□ -1.43
HERC1-208ENST00000560462 CAMK1DQ8IU85 385 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 AGGF1Q8N302 714 aaeCLIP6.1□□□□□ -1.43
HERC1-208ENST00000560462 AOPEPQ8N6M6 819 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 CCDC150Q8NCX0 1101 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 FBLIM1Q8WUP2 373 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 ZFAND2BQ8WV99 257 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 PGAP3Q96FM1 320 aaPredicted RBP6.1□□□□□ -1.43
HERC1-208ENST00000560462 HSFY1Q96LI6 401 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 EIF3CQ99613 913 aaKnown RBP6.1□□□□□ -1.43
HERC1-208ENST00000560462 CATSPERBQ9H7T0 1116 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 IPPKQ9H8X2 491 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 WDR54Q9H977 334 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 TXLNGQ9NUQ3 528 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 VPS18Q9P253 973 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 TEKT2Q9UIF3 430 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 AP1M2Q9Y6Q5 423 aa6.1□□□□□ -1.43
HERC1-208ENST00000560462 IGLV3-10A0A075B6K4 115 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 SHISA3A0PJX4 238 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 TMEM89A2RUT3 159 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 KLHL33A6NCF5 533 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 OR5K3A6NET4 321 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 OR52A4PA6NMU1 304 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 GAPDHSO14556 408 aaPredicted RBP6.09□□□□□ -1.43
HERC1-208ENST00000560462 MAP2K7O14733 419 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 TFECO14948 347 aaPredicted RBP6.09□□□□□ -1.43
HERC1-208ENST00000560462 GPRIN2O60269 458 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 ONECUT2O95948 504 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 SOD1P00441 154 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 ATP1A1P05023 1023 aaKnown RBP6.09□□□□□ -1.43
HERC1-208ENST00000560462 ITGAXP20702 1163 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 HNF1AP20823 631 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 LSP1P33241 339 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 CLCNKAP51800 687 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 POLR2LP62875 67 aaKnown RBP6.09□□□□□ -1.43
HERC1-208ENST00000560462 DPTQ07507 201 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 NME3Q13232 169 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 ETFDHQ16134 617 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 CNGA3Q16281 694 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 FBXL19-AS1Q494R0 122 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 VAX1Q5SQQ9 334 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 ARHGAP11AQ6P4F7 1023 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 SHISA2Q6UWI4 295 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 LINC00114Q6XXX2 140 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 SHISA6Q6ZSJ9 500 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 Q6ZVL8 140 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 FAM214BQ7L5A3 538 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 GALNTL5Q7Z4T8 443 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 DNAAF5Q86Y56 855 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 NETO2Q8NC67 525 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 MDS2Q8NDY4 140 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 SLCO2A1Q92959 643 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 FKBP10Q96AY3 582 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 SCMH1Q96GD3 660 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 MESP1Q9BRJ9 268 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 CXorf56Q9H5V9 222 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 KLC4Q9NSK0 619 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 ZNF701Q9NV72 531 aaPredicted RBP6.09□□□□□ -1.43
HERC1-208ENST00000560462 PANK4Q9NVE7 773 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 HRASLS2Q9NWW9 162 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 ZNF212Q9UDV6 495 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 SNX10Q9Y5X0 201 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 CCDC88CQ9P219 2028 aa6.09□□□□□ -1.43
HERC1-208ENST00000560462 SPTBP11277 2137 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 PHF3Q92576 2039 aaKnown RBP6.08□□□□□ -1.44
HERC1-208ENST00000560462 RYR2Q92736 4967 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 HYKKA2RU49 373 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 FAM157AC9JC47 383 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 M0QYV0 167 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 GNB5O14775 395 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 SRGAP2O75044 1071 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 OR2B3O76000 313 aa6.08□□□□□ -1.44
HERC1-208ENST00000560462 IL33O95760 270 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms