RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 GTPBP3Q969Y2 492 aaKnown RBP13.17□□□□□ -0.3
TRAF3-208ENST00000560371 OR51V1Q9H2C8 321 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 NOL6Q9H6R4 1146 aaKnown RBP13.17□□□□□ -0.3
TRAF3-208ENST00000560371 CFL2Q9Y281 166 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 SVILO95425 2214 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 ALPPP05187 535 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 PRPS1L1P21108 318 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 MAGEA11P43364 429 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 SEPHS1P49903 392 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 GPR107Q5VW38 600 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 RBM15BQ8NDT2 890 aaKnown RBP13.17□□□□□ -0.3
TRAF3-208ENST00000560371 IL23AQ9NPF7 189 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 ABCB10Q9NRK6 738 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 AP4B1Q9Y6B7 739 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 ZNF726A6NNF4 738 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 PLOD3O60568 738 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 RAB25P57735 213 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 RPS21P63220 83 aaKnown RBP13.17□□□□□ -0.3
TRAF3-208ENST00000560371 BTN3A2P78410 334 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 ENPP2Q13822 863 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 CXorf57Q6NSI4 855 aaKnown RBP13.17□□□□□ -0.3
TRAF3-208ENST00000560371 SLC30A8Q8IWU4 369 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 FAM47BQ8NA70 645 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 DCAKDQ8WVC6 231 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 WDR60Q8WVS4 1066 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 CDK15Q96Q40 435 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 ZBTB11O95625 1053 aaPredicted RBP13.17□□□□□ -0.3
TRAF3-208ENST00000560371 DNASE1L1P49184 302 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 CRISP3P54108 245 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 PPP3R1P63098 170 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 TRAP1Q12931 704 aaKnown RBP13.17□□□□□ -0.3
TRAF3-208ENST00000560371 SIM2Q14190 667 aaPredicted RBP13.17□□□□□ -0.3
TRAF3-208ENST00000560371 GPR68Q15743 365 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 NDUFA5Q16718 116 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 OLFML2AQ68BL7 652 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 OSTM1Q86WC4 334 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 TDRPQ86YL5 185 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 GPR65Q8IYL9 337 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 LPGAT1Q92604 370 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 PIGKQ92643 395 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 SPATA6Q9NWH7 488 aaPredicted RBP13.17□□□□□ -0.3
TRAF3-208ENST00000560371 SPATA7Q9P0W8 599 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 TESMINQ9Y4I5 508 aa13.17□□□□□ -0.3
TRAF3-208ENST00000560371 SOCS5O75159 536 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 GPIP06744 558 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 FRG2Q64ET8 278 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 CMTM7Q96FZ5 175 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 FRG2BQ96QU4 278 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 SIX2Q9NPC8 291 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 TAC3Q9UHF0 121 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 KLK1P06870 262 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 RPL6Q02878 288 aaKnown RBP13.16□□□□□ -0.3
TRAF3-208ENST00000560371 SEMA3AQ14563 771 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 SLC22A15Q8IZD6 547 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 OR6K6Q8NGW6 343 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 OVCA2Q8WZ82 227 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 KIAA1143Q96AT1 154 aaPredicted RBP13.16□□□□□ -0.3
TRAF3-208ENST00000560371 ROPN1LQ96C74 230 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 SMOQ99835 787 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 ZNF446Q9NWS9 450 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 CDH22Q9UJ99 828 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 SNX7Q9UNH6 387 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 DMTF1Q9Y222 760 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 ELOA3DA6NLF2 546 aaPredicted RBP13.16□□□□□ -0.3
TRAF3-208ENST00000560371 A8MUI8 341 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 TRAPPC6AO75865 159 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 PAK4O96013 591 aaPredicted RBP13.16□□□□□ -0.3
TRAF3-208ENST00000560371 TCF4P15884 667 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 SLC26A3P40879 764 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 CDH12P55289 794 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 CCINQ13939 588 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 ELOA3BQ3SY89 546 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 IQCHQ86VS3 1027 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 CLDN19Q8N6F1 224 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 ELOA3Q8NG57 546 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 ART5Q96L15 291 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 ZNF570Q96NI8 536 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 ZNF638Q14966 1978 aaKnown RBP13.16□□□□□ -0.3
TRAF3-208ENST00000560371 PRORSD1PA6NEY8 169 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 VSTM5A8MXK1 200 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 AGR2O95994 175 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 ARHGDIBP52566 201 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 PUDPQ08623 228 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 DMPKQ09013 629 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 SERINC5Q86VE9 423 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 SLC13A3Q8WWT9 602 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 STRADBQ9C0K7 418 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 KCNK6Q9Y257 313 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 SLC9B1Q4ZJI4 515 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 UBAP2Q5T6F2 1119 aaKnown RBP13.16□□□□□ -0.3
TRAF3-208ENST00000560371 PGBD2Q6P3X8 592 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 CROCCP3Q8IVE0 287 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 PIWIL1Q96J94 861 aaKnown RBP13.16□□□□□ -0.3
TRAF3-208ENST00000560371 COMMD4Q9H0A8 199 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 ARL3P36405 182 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 ERVK-8P63133 956 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 RASGEF1BQ0VAM2 473 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 IFI44LQ53G44 452 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 BHLHE41Q9C0J9 482 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms