RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CSF2RBP32927 897 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 MAGOHP61326 146 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 DAB2P98082 770 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 SETDB1Q15047 1291 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 PCBP2Q15366 365 aaKnown RBP eCLIP14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 CDCP2Q5VXM1 449 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 TMPRSS9Q7Z410 1059 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 CACTIN-AS1Q8N1I8 211 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 TCAIMQ8N3R3 496 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 DEFB124Q8NES8 71 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 OR4E2Q8NGC2 313 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 WDR48Q8TAF3 677 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 TCP10LQ8TDR4 215 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 ATL1Q8WXF7 558 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 JPH3Q8WXH2 748 aaPredicted RBP14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 HIST1H2AHQ96KK5 128 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 OR2A14Q96R47 310 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 HIST1H2AJQ99878 128 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 H2AFJQ9BTM1 129 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 TRIM54Q9BYV2 358 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 C12orf65Q9H3J6 166 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 LRRN3Q9H3W5 708 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 XKR8Q9H6D3 395 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 INTS7Q9NVH2 962 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 ARL15Q9NXU5 204 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 SPHK1Q9NYA1 384 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 KCNK4Q9NYG8 393 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 UTP6Q9NYH9 597 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 SLC17A7Q9P2U7 560 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 POMT2Q9UKY4 750 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 TDRKHQ9Y2W6 561 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 ASB1Q9Y576 335 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 SNRNP200O75643 2136 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 PCM1Q15154 2024 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 CPED1A4D0V7 1026 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 GOLGA6L10A6NI86 522 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 ZNF839A8K0R7 811 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 A8MT66 165 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 HMGB1P1B2RPK0 211 aaPredicted RBP14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 MATN2O00339 956 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 TM9SF1O15321 606 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 DLX3O60479 287 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 SPAG7O75391 227 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 IPO13O94829 963 aaKnown RBP14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 FKBP9O95302 570 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 CDK4P11802 303 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 EPORP19235 508 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 RPA3P35244 121 aaPredicted RBP14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 PDX1P52945 283 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 ALDH18A1P54886 795 aaKnown RBP14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 CCL7P80098 99 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 KRT33BQ14525 404 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 KIR2DS3Q14952 304 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 PCLAFQ15004 111 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 SLC5A12Q1EHB4 618 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 ZYG11AQ6WRX3 759 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 ZNF574Q6ZN55 896 aaPredicted RBP14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 SLCO6A1Q86UG4 719 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 SLITRK4Q8IW52 837 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 CARFQ8N187 725 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 LMNTD1Q8N9Z9 388 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 SMPDL3AQ92484 453 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 ZBTB9Q96C00 473 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 OR4K3Q96R72 315 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 DPYSL5Q9BPU6 564 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 ABCG4Q9H172 646 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 SRMSQ9H3Y6 488 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 SLC32A1Q9H598 525 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 CPSF2Q9P2I0 782 aaKnown RBP14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 CIDEBQ9UHD4 219 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 LNPEPQ9UIQ6 1025 aa14.31□□□□□ -0.12
SNRPA1-207ENST00000559309 OR6C74A6NCV1 312 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 TOX3O15405 576 aaPredicted RBP14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 DUX1O43812 170 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 RFPL3O75679 317 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 CPNE6O95741 557 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 NPPBP16860 134 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 CCND1P24385 295 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 LSSP48449 732 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 TBPL1P62380 186 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 ZFP36L1Q07352 338 aaKnown RBP14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 C18orf21Q32NC0 220 aaPredicted RBP14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 PTCHD3Q3KNS1 767 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 TMEM71Q6P5X7 295 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 KLHL35Q6PF15 583 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 LCTLQ6UWM7 567 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 FRA10AC1Q70Z53 315 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 OOSP2Q86WS3 158 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 OR10G6Q8NH81 332 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 L3HYPDHQ96EM0 354 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 TSNARE1Q96NA8 513 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 CD180Q99467 661 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 CD244Q9BZW8 370 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 CHRNA10Q9GZZ6 450 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 ENAMQ9NRM1 1142 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 OXSMQ9NWU1 459 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 HRASLS2Q9NWW9 162 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 COPG2Q9UBF2 871 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 UNC13CQ8NB66 2214 aa14.3□□□□□ -0.12
SNRPA1-207ENST00000559309 IGKV1-8A0A0C4DH67 115 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms