RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 POT1Q9NUX5 634 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 HACD3Q9P035 362 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 IL17CQ9P0M4 197 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 CRLS1Q9UJA2 301 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 PILRAQ9UKJ1 303 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 RPS6KL1Q9Y6S9 549 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 MN1Q10571 1320 aaPredicted RBP7.16□□□□□ -1.26
SPG11-213ENST00000558988 BPTFQ12830 3046 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 ZNF462Q96JM2 2506 aa7.16□□□□□ -1.26
SPG11-213ENST00000558988 WDFY3Q8IZQ1 3526 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 HACD1B0YJ81 288 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 APOC4-APOC2K7ER74 178 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 PJA2O43164 708 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 NDUFA10O95299 355 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 APOC2P02655 101 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 SLC35G4P0C7Q5 338 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 RBP3P10745 1247 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 XRCC1P18887 633 aaPredicted RBP7.15□□□□□ -1.26
SPG11-213ENST00000558988 TCN2P20062 427 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 LPOP22079 712 aaPredicted RBP7.15□□□□□ -1.26
SPG11-213ENST00000558988 OAS2P29728 719 aaKnown RBP7.15□□□□□ -1.26
SPG11-213ENST00000558988 CAPZBP47756 277 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 KCNAB2Q13303 367 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 TUBB3Q13509 450 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 PWP1Q13610 501 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 ITGA9Q13797 1035 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 ERV3-1Q14264 604 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 PRPSAP1Q14558 356 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 RPE65Q16518 533 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 TAZQ16635 292 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 LONRF2Q1L5Z9 754 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 SKIDA1Q1XH10 827 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 LDLRAP1Q5SW96 308 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 ARMC6Q6NXE6 501 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 FBXO38Q6PIJ6 1188 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 C6orf15Q6UXA7 325 aaPredicted RBP7.15□□□□□ -1.26
SPG11-213ENST00000558988 CERS6Q6ZMG9 384 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 KIAA1328Q86T90 577 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 CDKL3Q8IVW4 592 aaPredicted RBP7.15□□□□□ -1.26
SPG11-213ENST00000558988 FAM26EQ8N5C1 309 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 SIDT2Q8NBJ9 832 aaKnown RBP7.15□□□□□ -1.26
SPG11-213ENST00000558988 DDHD1Q8NEL9 900 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 ZNF398Q8TD17 642 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 BRSK1Q8TDC3 778 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 DCUN1D1Q96GG9 259 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 ZDHHC12Q96GR4 267 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 C12orf66Q96MD2 445 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 VAT1Q99536 393 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 FERMT1Q9BQL6 677 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 OSBPL8Q9BZF1 889 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 B3GNT4Q9C0J1 378 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 SLC25A18Q9H1K4 315 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 EPB41L1Q9H4G0 881 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 TRABDQ9H4I3 376 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 CLMPQ9H6B4 373 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 ASB8Q9H765 288 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 FBXO8Q9NRD0 319 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 STARD5Q9NSY2 213 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 PIH1D1Q9NWS0 290 aaKnown RBP7.15□□□□□ -1.26
SPG11-213ENST00000558988 SIDT1Q9NXL6 827 aaKnown RBP7.15□□□□□ -1.26
SPG11-213ENST00000558988 PDP2Q9P2J9 529 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 NFKBIL1Q9UBC1 381 aaPredicted RBP7.15□□□□□ -1.26
SPG11-213ENST00000558988 CROTQ9UKG9 612 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 TRHDEQ9UKU6 1024 aa7.15□□□□□ -1.26
SPG11-213ENST00000558988 PACSIN2Q9UNF0 486 aaPredicted RBP7.15□□□□□ -1.26
SPG11-213ENST00000558988 ZNF106Q9H2Y7 1883 aaKnown RBP7.15□□□□□ -1.27
SPG11-213ENST00000558988 IGHV5-51A0A0C4DH38 117 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 UBA6A0AVT1 1052 aaPredicted RBP7.14□□□□□ -1.27
SPG11-213ENST00000558988 GSAPA4D1B5 854 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 OR6C74A6NCV1 312 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 C2orf81A6NN90 581 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 GAPDHSO14556 408 aaPredicted RBP7.14□□□□□ -1.27
SPG11-213ENST00000558988 ANXA9O76027 345 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 SRP72O76094 671 aaKnown RBP7.14□□□□□ -1.27
SPG11-213ENST00000558988 FTCDO95954 541 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 EPOP01588 193 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 C9P02748 559 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 EBLN1P0CF75 366 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 MTHFD1P11586 935 aaKnown RBP7.14□□□□□ -1.27
SPG11-213ENST00000558988 SFTPCP11686 197 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 TPH1P17752 444 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 ITGB6P18564 788 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 NR1D1P20393 614 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 F8A1P23610 371 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 CTNNA1P35221 906 aaKnown RBP7.14□□□□□ -1.27
SPG11-213ENST00000558988 CETN2P41208 172 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 STAT5AP42229 794 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 ZNF75DP51815 510 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 HADHBP55084 474 aaKnown RBP7.14□□□□□ -1.27
SPG11-213ENST00000558988 RWDD2BP57060 319 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 DGCR2P98153 550 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 TCEAL1Q15170 157 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 TAF1AQ15573 450 aaPredicted RBP7.14□□□□□ -1.27
SPG11-213ENST00000558988 GPR19Q15760 415 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 ZRANB3Q5FWF4 1079 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 DNTTIP2Q5QJE6 756 aaKnown RBP7.14□□□□□ -1.27
SPG11-213ENST00000558988 ANKRD20A2Q5SQ80 823 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 ANKRD20A1Q5TYW2 823 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 AGAP9Q5VTM2 703 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 ANKRD20A3Q5VUR7 823 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms