RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ZBTB26Q9HCK0 441 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 INTS7Q9NVH2 962 aaKnown RBP17.51■□□□□ 0.39
CLPX-203ENST00000558958 SLC22A14Q9Y267 594 aa17.51■□□□□ 0.39
CLPX-203ENST00000558958 LNP1A1A4G5 178 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 LYPLA1O75608 230 aaPredicted RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 WDR47O94967 919 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 SHMT2P34897 504 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 TBPL1P62380 186 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 OCRLQ01968 901 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 GTF2H2Q13888 395 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 ARL13AQ5H913 290 aaPredicted RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 CAPN13Q6MZZ7 669 aaPredicted RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 GTF2H2CQ6P1K8 395 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 TMEM26Q6ZUK4 368 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 GOLGA7Q7Z5G4 137 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 THOC6Q86W42 341 aaKnown RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 AMIGO1Q86WK6 493 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 SLC35F3Q8IY50 421 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 TEX9Q8N6V9 391 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 OR4C6Q8NH72 309 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 JPH3Q8WXH2 748 aaPredicted RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 SMPDL3AQ92484 453 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 ZNF317Q96PQ6 595 aaPredicted RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 STN1Q9H668 368 aaKnown RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 UCK1Q9HA47 277 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 SLCO1B3Q9NPD5 702 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 SEMA4BQ9NPR2 832 aaPredicted RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 DNAJC11Q9NVH1 559 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 OR6C2Q9NZP2 312 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 DLL1O00548 723 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 TRIM38O00635 465 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 PPM1DO15297 605 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 SHOX2O60902 331 aaPredicted RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 CHRNGP07510 517 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 ZNF883P0CG24 379 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 ALPPL2P10696 532 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 EPB42P16452 691 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 TSPAN8P19075 237 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 CCND1P24385 295 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 PIK3CGP48736 1102 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 ATXN3P54252 364 aaPredicted RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 GALNT1Q10472 559 aaPredicted RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 LCP2Q13094 533 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 PLCL1Q15111 1095 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 ZCCHC8Q6NZY4 707 aaKnown RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 SUSD1Q6UWL2 747 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 C2orf73Q8N5S3 287 aaPredicted RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 OR4E2Q8NGC2 313 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 TRPC4APQ8TEL6 797 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 OR4K3Q96R72 315 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 SORT1Q99523 831 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 SRMSQ9H3Y6 488 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 CCDC177Q9NQR7 707 aaPredicted RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 FAM86C1Q9NVL1 165 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 ANGPTL3Q9Y5C1 460 aa17.5■□□□□ 0.39
CLPX-203ENST00000558958 ARID1BQ8NFD5 2236 aaPredicted RBP17.5■□□□□ 0.39
CLPX-203ENST00000558958 A0A1W2PPV9 198 aa17.49■□□□□ 0.39
CLPX-203ENST00000558958 PPP6CO00743 305 aa17.49■□□□□ 0.39
CLPX-203ENST00000558958 UBFD1O14562 309 aaKnown RBP17.49■□□□□ 0.39
CLPX-203ENST00000558958 SNUPNO95149 360 aaKnown RBP17.49■□□□□ 0.39
CLPX-203ENST00000558958 HSPA4LO95757 839 aa17.49■□□□□ 0.39
CLPX-203ENST00000558958 MLYCDO95822 493 aa17.49■□□□□ 0.39
CLPX-203ENST00000558958 EPORP19235 508 aa17.49■□□□□ 0.39
CLPX-203ENST00000558958 TSTA3Q13630 321 aaPredicted RBP17.49■□□□□ 0.39
CLPX-203ENST00000558958 SF3A2Q15428 464 aaKnown RBP17.49■□□□□ 0.39
CLPX-203ENST00000558958 SNX31Q8N9S9 440 aa17.49■□□□□ 0.39
CLPX-203ENST00000558958 SETD7Q8WTS6 366 aaKnown RBP17.49■□□□□ 0.39
CLPX-203ENST00000558958 SH3KBP1Q96B97 665 aa17.49■□□□□ 0.39
CLPX-203ENST00000558958 C7orf26Q96N11 449 aa17.49■□□□□ 0.39
CLPX-203ENST00000558958 TWSG1Q9GZX9 223 aa17.49■□□□□ 0.39
CLPX-203ENST00000558958 NOL11Q9H8H0 719 aaKnown RBP17.49■□□□□ 0.39
CLPX-203ENST00000558958 IPPKQ9H8X2 491 aa17.49■□□□□ 0.39
CLPX-203ENST00000558958 EML4Q9HC35 981 aaKnown RBP17.49■□□□□ 0.39
CLPX-203ENST00000558958 DNAAF2Q9NVR5 837 aaKnown RBP17.49■□□□□ 0.39
CLPX-203ENST00000558958 MUC6Q6W4X9 2439 aa17.48■□□□□ 0.39
CLPX-203ENST00000558958 FAM221BA6H8Z2 402 aa17.48■□□□□ 0.39
CLPX-203ENST00000558958 OR7A17O14581 309 aa17.48■□□□□ 0.39
CLPX-203ENST00000558958 LMNAP02545 664 aaKnown RBP17.48■□□□□ 0.39
CLPX-203ENST00000558958 VIMP08670 466 aaKnown RBP17.48■□□□□ 0.39
CLPX-203ENST00000558958 NPPBP16860 134 aa17.48■□□□□ 0.39
CLPX-203ENST00000558958 CDC16Q13042 620 aa17.48■□□□□ 0.39
CLPX-203ENST00000558958 FAM47EQ6ZV65 393 aa17.48■□□□□ 0.39
CLPX-203ENST00000558958 ADGRF3Q8IZF5 1079 aa17.48■□□□□ 0.39
CLPX-203ENST00000558958 FAM181AQ8N9Y4 354 aa17.48■□□□□ 0.39
CLPX-203ENST00000558958 CHMP6Q96FZ7 201 aa17.48■□□□□ 0.39
CLPX-203ENST00000558958 ZNF382Q96SR6 550 aa17.48■□□□□ 0.39
CLPX-203ENST00000558958 MIPEPQ99797 713 aa17.48■□□□□ 0.39
CLPX-203ENST00000558958 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.48■□□□□ 0.39
CLPX-203ENST00000558958 PCDHGB2Q9Y5G2 931 aa17.48■□□□□ 0.39
CLPX-203ENST00000558958 A0A1B0GTL3 188 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 LILRA5A6NI73 299 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 BTN3A3O00478 584 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 SIGLEC6O43699 453 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 NUDT21O43809 227 aaKnown RBP17.47■□□□□ 0.39
CLPX-203ENST00000558958 PRICKLE3O43900 615 aaPredicted RBP17.47■□□□□ 0.39
CLPX-203ENST00000558958 EDF1O60869 148 aaKnown RBP17.47■□□□□ 0.39
CLPX-203ENST00000558958 KATNA1O75449 491 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 CHRM5P08912 532 aaPredicted RBP17.47■□□□□ 0.39
CLPX-203ENST00000558958 SEC24CP53992 1094 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 SH3BP2P78314 561 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms