RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 BOP1Q14137 746 aaKnown RBP11.29□□□□□ -0.6
SMAD3-206ENST00000558739 PAFAH1B3Q15102 231 aaKnown RBP11.29□□□□□ -0.6
SMAD3-206ENST00000558739 SYCP1Q15431 976 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 ZNF658BQ4V348 819 aaPredicted RBP11.29□□□□□ -0.6
SMAD3-206ENST00000558739 BCL7AQ4VC05 210 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 SPINK14Q6IE38 97 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 TUBA3EQ6PEY2 450 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 CHSY3Q70JA7 882 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 CPNE8Q86YQ8 564 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 MCATQ8IVS2 390 aaKnown RBP11.29□□□□□ -0.6
SMAD3-206ENST00000558739 VWA5B2Q8N398 1253 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 ACRBPQ8NEB7 543 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 HM13Q8TCT9 377 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 MIEF2Q96C03 454 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 SYT11Q9BT88 431 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 COG4Q9H9E3 785 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 RASSF1Q9NS23 344 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 SMOXQ9NWM0 555 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 STMN3Q9NZ72 180 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 UBP1Q9NZI7 540 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 IL17CQ9P0M4 197 aa11.29□□□□□ -0.6
SMAD3-206ENST00000558739 CHD3Q12873 2000 aaKnown RBP11.29□□□□□ -0.6
SMAD3-206ENST00000558739 MGAM2Q2M2H8 2515 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 A0A1W2PQ72 361 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 RNF212BA8MTL3 300 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 IDSB3KWA1 339 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 WIPF1O43516 503 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 NRP2O60462 931 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 GADD45BO75293 160 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-206ENST00000558739 NDST3O95803 873 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 CARSP49589 748 aaKnown RBP11.28□□□□□ -0.6
SMAD3-206ENST00000558739 DPYSL3Q14195 570 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 FASTKQ14296 549 aaKnown RBP11.28□□□□□ -0.6
SMAD3-206ENST00000558739 KRT81Q14533 505 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 OR1C1Q15619 314 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 CCDC122Q5T0U0 273 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 GALNTL5Q7Z4T8 443 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-206ENST00000558739 CPSF7Q8N684 471 aaKnown RBP11.28□□□□□ -0.6
SMAD3-206ENST00000558739 CCNYQ8ND76 341 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 ASB5Q8WWX0 329 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 TADA1Q96BN2 335 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 SCMH1Q96GD3 660 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 VPS50Q96JG6 964 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 BTBD6Q96KE9 485 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 COX4I2Q96KJ9 171 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 LINC00615Q96LM1 132 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-206ENST00000558739 NPAS2Q99743 824 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 GNPTGQ9UJJ9 305 aa11.28□□□□□ -0.6
SMAD3-206ENST00000558739 IGHV3-20A0A0C4DH32 117 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 A0A1B0GTH9 108 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 A8MUI8 341 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 PIM1P11309 404 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-206ENST00000558739 ZNF24P17028 368 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 EEF1DP29692 281 aaKnown RBP11.27□□□□□ -0.61
SMAD3-206ENST00000558739 PRLHRP49683 370 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 ARSFP54793 590 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 IFI35P80217 286 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-206ENST00000558739 BOLA3Q53S33 107 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 RIPOR1Q6ZS17 1223 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 TAX1BP1Q86VP1 789 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 SHISA5Q8N114 240 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 PQLC3Q8N755 202 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 TFGQ92734 400 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-206ENST00000558739 CCM2Q9BSQ5 444 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 MVB12BQ9H7P6 319 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 DMRT3Q9NQL9 472 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 RIC8BQ9NVN3 520 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 CRIM1Q9NZV1 1036 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 ZNF282Q9UDV7 671 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-206ENST00000558739 CIDEBQ9UHD4 219 aa11.27□□□□□ -0.61
SMAD3-206ENST00000558739 H7C1Q1 480 aa11.26□□□□□ -0.61
SMAD3-206ENST00000558739 SMAD7O15105 426 aaKnown RBP11.26□□□□□ -0.61
SMAD3-206ENST00000558739 RAF1P04049 648 aa11.26□□□□□ -0.61
SMAD3-206ENST00000558739 GJC1P36383 396 aa11.26□□□□□ -0.61
SMAD3-206ENST00000558739 CD96P40200 585 aa11.26□□□□□ -0.61
SMAD3-206ENST00000558739 RFC3P40938 356 aa11.26□□□□□ -0.61
SMAD3-206ENST00000558739 NUP107P57740 925 aa11.26□□□□□ -0.61
SMAD3-206ENST00000558739 OCA2Q04671 838 aa11.26□□□□□ -0.61
SMAD3-206ENST00000558739 TCP11X2Q5H9J9 407 aa11.26□□□□□ -0.61
SMAD3-206ENST00000558739 KDELC1Q6UW63 502 aa11.26□□□□□ -0.61
SMAD3-206ENST00000558739 NAPRTQ6XQN6 538 aa11.26□□□□□ -0.61
SMAD3-206ENST00000558739 SLC25A41Q8N5S1 370 aa11.26□□□□□ -0.61
SMAD3-206ENST00000558739 C2orf73Q8N5S3 287 aaPredicted RBP11.26□□□□□ -0.61
SMAD3-206ENST00000558739 FAM57AQ8TBR7 257 aa11.26□□□□□ -0.61
SMAD3-206ENST00000558739 BLOC1S5Q8TDH9 187 aa11.26□□□□□ -0.61
SMAD3-206ENST00000558739 TENM1Q9UKZ4 2725 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 IGLV3-12A0A075B6K2 115 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 ISM1B1AKI9 464 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 IFRD1O00458 451 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-206ENST00000558739 CTSVO60911 334 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 NEURL1O76050 574 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 SEC24DO94855 1032 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-206ENST00000558739 MLYCDO95822 493 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 SHMT2P34897 504 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 PTGS2P35354 604 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 EMP2P54851 167 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 VSX2P58304 361 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-206ENST00000558739 PMPCAQ10713 525 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 ITGA9Q13797 1035 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms