RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 USP10Q14694 798 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 SLMAPQ14BN4 828 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 ZIC1Q15915 447 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 UAP1Q16222 522 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 BROXQ5VW32 411 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 MBOAT1Q6ZNC8 495 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 CDHR3Q6ZTQ4 885 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 CYS1Q717R9 158 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 CEP97Q8IW35 865 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 SYTL1Q8IYJ3 562 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 CRELD1Q96HD1 420 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 MIPEPQ99797 713 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 MCMBPQ9BTE3 642 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 DPH1Q9BZG8 443 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 TSPYL1Q9H0U9 437 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 USP24Q9UPU5 2620 aa15.29■□□□□ 0.04
RABGGTA-206ENST00000558649 APC2O95996 2303 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 ESPNB1AK53 854 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 PHGDHO43175 533 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 ZNF500O60304 480 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 TIAF1O95411 115 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 TSPAN12O95859 305 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 FGF5P12034 268 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 ZNF37AP17032 561 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 OAS2P29728 719 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 RPA3P35244 121 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 SPRP35270 261 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 ATP1A2P50993 1020 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 TLE3Q04726 772 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 SRSF6Q13247 344 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 SP140Q13342 867 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 CYP2A13Q16696 494 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 COL28A1Q2UY09 1125 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 KIAA1614Q5VZ46 1190 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 PWWP2BQ6NUJ5 590 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 TMEM207Q6UWW9 146 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 TMEM126BQ8IUX1 230 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 GSPT2Q8IYD1 628 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 IL22RA1Q8N6P7 574 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 UHMK1Q8TAS1 419 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 MCOLN3Q8TDD5 553 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 ZNF480Q8WV37 535 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 DLG3Q92796 817 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 ZNF501Q96CX3 271 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 TCTN2Q96GX1 697 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 UNKQ9C0B0 810 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 GPAMQ9HCL2 828 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 FAM60AQ9NP50 221 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 IRAK4Q9NWZ3 460 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 PDE10AQ9Y233 779 aa15.28■□□□□ 0.04
RABGGTA-206ENST00000558649 A0A1W2PPV9 198 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 NPEPPSL1A6NEC2 478 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 ZNF839A8K0R7 811 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 RAD1O60671 282 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 SCRG1O75711 98 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 ERGP11308 486 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 POU4F1Q01851 419 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 NAB1Q13506 487 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 COL9A2Q14055 689 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 PHKG1Q16816 387 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 MANEAQ5SRI9 462 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 GRTP1Q5TC63 336 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 THEMIS2Q5TEJ8 643 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 CACNA2D3Q8IZS8 1091 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 NLGN4XQ8N0W4 816 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 GALNT6Q8NCL4 622 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 FBXO15Q8NCQ5 510 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 NLGN4YQ8NFZ3 816 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 OR1L3Q8NH93 324 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 HMGCLL1Q8TB92 370 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 SMPDL3AQ92484 453 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 ALKBH8Q96BT7 664 aaKnown RBP15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 TSPAN17Q96FV3 270 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 GPR22Q99680 433 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 TWSG1Q9GZX9 223 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 PARVBQ9HBI1 364 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 CPNE5Q9HCH3 593 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 INTS7Q9NVH2 962 aaKnown RBP15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 UTP6Q9NYH9 597 aaKnown RBP15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 TAC3Q9UHF0 121 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 PILRAQ9UKJ1 303 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 IKZF3Q9UKT9 509 aa15.27■□□□□ 0.04
RABGGTA-206ENST00000558649 DMXL2Q8TDJ6 3036 aa15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 CDC7O00311 574 aa15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 SLC16A5O15375 505 aa15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 PRICKLE3O43900 615 aaPredicted RBP15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 GUCA1CO95843 209 aa15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 NTRK1P04629 796 aa15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 HIST1H2AGP0C0S8 130 aaPredicted RBP15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 STMN1P16949 149 aa15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 HIST1H2ADP20671 130 aa15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 IMPA1P29218 277 aa15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 HSD17B2P37059 387 aa15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 GRIA3P42263 894 aa15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 YBX1P67809 324 aaKnown RBP15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 CXADRP78310 365 aa15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 ILF2Q12905 390 aaKnown RBP15.26■□□□□ 0.03
RABGGTA-206ENST00000558649 BMPR2Q13873 1038 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms