RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 TRAM1L1Q8N609 369 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 C2CD4AQ8NCU7 369 aaPredicted RBP10.05□□□□□ -0.8
TPM1-212ENST00000558347 HDAC10Q969S8 669 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 SPDL1Q96EA4 605 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 CDKN2AIPNLQ96HQ2 116 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 TMEM74Q96NL1 305 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 BBC3Q96PG8 261 aaPredicted RBP10.05□□□□□ -0.8
TPM1-212ENST00000558347 ZSCAN5AQ9BUG6 496 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 STRADBQ9C0K7 418 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 OR2AG1Q9H205 316 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 SEMA6CQ9H3T2 930 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 BPIFA1Q9NP55 256 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 IARS2Q9NSE4 1012 aaKnown RBP10.05□□□□□ -0.8
TPM1-212ENST00000558347 SLC17A6Q9P2U8 582 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 PKP3Q9Y446 797 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.05□□□□□ -0.8
TPM1-212ENST00000558347 PTPRQQ9UMZ3 2332 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 CACNA1GO43497 2377 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 CCDC162PA2VCL2 907 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 MAGEA13PA6NCF6 341 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 TMX2-CTNND1H3BSU7 103 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 GRID2O43424 1007 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 BUD23O43709 281 aaKnown RBP10.04□□□□□ -0.8
TPM1-212ENST00000558347 TRIM13O60858 407 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 MTX2O75431 263 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 SLC25A14O95258 325 aaPredicted RBP10.04□□□□□ -0.8
TPM1-212ENST00000558347 CPNE6O95741 557 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 LINGO3P0C6S8 592 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 ACP5P13686 325 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 ITIH1P19827 911 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 OGNP20774 298 aaKnown RBP10.04□□□□□ -0.8
TPM1-212ENST00000558347 CD1CP29017 333 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 CRABP2P29373 138 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 ETV5P41161 510 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 CFHR1Q03591 330 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 ASPHQ12797 758 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 EIF3IQ13347 325 aaKnown RBP10.04□□□□□ -0.8
TPM1-212ENST00000558347 PEX6Q13608 980 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 SOWAHCQ53LP3 525 aaPredicted RBP10.04□□□□□ -0.8
TPM1-212ENST00000558347 NKAIN2Q5VXU1 208 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 ZDHHC20Q5W0Z9 365 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 AFTPHQ6ULP2 937 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 ZNF574Q6ZN55 896 aaPredicted RBP10.04□□□□□ -0.8
TPM1-212ENST00000558347 USP53Q70EK8 1073 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 PIM3Q86V86 326 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 KIRREL3Q8IZU9 778 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 OR4L1Q8NH43 312 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 FBXO27Q8NI29 283 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 SLC37A2Q8TED4 501 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 KCNE4Q8WWG9 221 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 TSNARE1Q96NA8 513 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 GPR22Q99680 433 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 NUDT22Q9BRQ3 303 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 RMI1Q9H9A7 625 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 S100A14Q9HCY8 104 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 RAD18Q9NS91 495 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 IL1RAPL1Q9NZN1 696 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 VTI1BQ9UEU0 232 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 TBC1D29Q9UFV1 150 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 SCOCQ9UIL1 159 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 TMPRSS11EQ9UL52 423 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 LOXL2Q9Y4K0 774 aa10.04□□□□□ -0.8
TPM1-212ENST00000558347 IGHV1OR21-1A0A087WYE8 117 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 A0A096LPK6 155 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 A6NCN8 305 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 G3V2L1 256 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 GPR39O43194 453 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 HSPA4LO95757 839 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 GOT2P00505 430 aaKnown RBP10.03□□□□□ -0.8
TPM1-212ENST00000558347 PAX7P23759 505 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 CSF2RBP32927 897 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 CA5AP35218 305 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 MLLT3P42568 568 aaPredicted RBP10.03□□□□□ -0.8
TPM1-212ENST00000558347 GPR3P46089 330 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 FASLGP48023 281 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 LEPRP48357 1165 aaKnown RBP10.03□□□□□ -0.8
TPM1-212ENST00000558347 CXADRP78310 365 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 BIRC2Q13490 618 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 ITGA9Q13797 1035 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 PTPRCAPQ14761 206 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 C16orf72Q14CZ0 275 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 PLA2G4EQ3MJ16 856 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 ATP13A5Q4VNC0 1218 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 CFAP157Q5JU67 520 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 PHF19Q5T6S3 580 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 ZNF470Q6ECI4 717 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 MRNIPQ6NTE8 343 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 TMEM154Q6P9G4 183 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 CRTC3Q6UUV7 619 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 ZYG11AQ6WRX3 759 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 ZNF761Q86XN6 746 aaPredicted RBP10.03□□□□□ -0.8
TPM1-212ENST00000558347 CILP2Q8IUL8 1156 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 RCBTB1Q8NDN9 531 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 OR6P1Q8NGX9 317 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 DTX3LQ8TDB6 740 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 GLYATL1Q969I3 302 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 CNDP1Q96KN2 507 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 PLEKHG4BQ96PX9 1271 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 TCF12Q99081 682 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 RHOJQ9H4E5 214 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms