RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 OR6C2Q9NZP2 312 aa2.94□□□□□ -1.94
SPG11-206ENST00000558093 PAK5Q9P286 719 aa2.94□□□□□ -1.94
SPG11-206ENST00000558093 C19orf25Q9UFG5 118 aaPredicted RBP2.94□□□□□ -1.94
SPG11-206ENST00000558093 DDX25Q9UHL0 483 aaKnown RBP2.94□□□□□ -1.94
SPG11-206ENST00000558093 SLC24A2Q9UI40 661 aa2.94□□□□□ -1.94
SPG11-206ENST00000558093 RPS6KA6Q9UK32 745 aa2.94□□□□□ -1.94
SPG11-206ENST00000558093 PPP1R3CQ9UQK1 317 aa2.94□□□□□ -1.94
SPG11-206ENST00000558093 PADI2Q9Y2J8 665 aa2.94□□□□□ -1.94
SPG11-206ENST00000558093 C2orf81A6NN90 581 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 MAGEC1O60732 1142 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 KHDRBS3O75525 346 aaKnown RBP2.93□□□□□ -1.94
SPG11-206ENST00000558093 MOCS3O95396 460 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 STARD3NLO95772 234 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 TRUB2O95900 331 aaKnown RBP2.93□□□□□ -1.94
SPG11-206ENST00000558093 SMIM18P0DKX4 95 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 HAPLN1P10915 354 aaPredicted RBP2.93□□□□□ -1.94
SPG11-206ENST00000558093 ZNF10P21506 573 aaPredicted RBP2.93□□□□□ -1.94
SPG11-206ENST00000558093 SP100P23497 879 aaPredicted RBP2.93□□□□□ -1.94
SPG11-206ENST00000558093 CSTF2P33240 577 aaKnown RBP eCLIP2.93□□□□□ -1.94
SPG11-206ENST00000558093 NNMTP40261 264 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 CASP2P42575 452 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 GSDMDP57764 484 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 PRKG2Q13237 762 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 CBWD6Q4V339 395 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 SYT14P1Q58G82 188 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 SLC25A53Q5H9E4 307 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 CBWD3Q5JTY5 395 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 SPDYCQ5MJ68 293 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 ZNF613Q6PF04 617 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 TMEM207Q6UWW9 146 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 TMPRSS11BQ86T26 416 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 LRRTM1Q86UE6 522 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 ZNF595Q8IYB9 648 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 TTC30BQ8N4P2 665 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 TSPAN14Q8NG11 270 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 OR10S1Q8NGN2 331 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 OR10G8Q8NGN5 311 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 CFAP61Q8NHU2 1237 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 SMAP2Q8WU79 429 aaPredicted RBP2.93□□□□□ -1.94
SPG11-206ENST00000558093 CENPTQ96BT3 561 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 GCNAQ96QF7 691 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 ABHD1Q96SE0 405 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 RBM4BQ9BQ04 359 aaKnown RBP2.93□□□□□ -1.94
SPG11-206ENST00000558093 CCDC106Q9BWC9 280 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 APOL6Q9BWW8 343 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 OR2B2Q9GZK3 357 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 UPF3AQ9H1J1 476 aaKnown RBP2.93□□□□□ -1.94
SPG11-206ENST00000558093 CPVLQ9H3G5 476 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 GOLPH3LQ9H4A5 285 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 CPSF3Q9UKF6 684 aaKnown RBP2.93□□□□□ -1.94
SPG11-206ENST00000558093 TMED3Q9Y3Q3 217 aa2.93□□□□□ -1.94
SPG11-206ENST00000558093 MAGED1Q9Y5V3 778 aaPredicted RBP2.93□□□□□ -1.94
SPG11-206ENST00000558093 hCG_1809904A0A1W2PP81 198 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 A0A1W2PPE2 198 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 A0A1W2PR64 198 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 TMEM221A6NGB7 291 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 AHCYL1O43865 530 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 ZFAND5O76080 213 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 DARSP14868 501 aaKnown RBP2.92□□□□□ -1.94
SPG11-206ENST00000558093 LHCGRP22888 699 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 MAPK12P53778 367 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 TAF10Q12962 218 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 HERC3Q15034 1050 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 CA9Q16790 459 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 FASTKD1Q53R41 847 aaKnown RBP2.92□□□□□ -1.94
SPG11-206ENST00000558093 BMP2KLQ5H9B9 411 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 TCTE1Q5JU00 501 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 SLC35D3Q5M8T2 416 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 C6orf163Q5TEZ5 329 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 MFSD12Q6NUT3 480 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 DOK6Q6PKX4 331 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 IL27RAQ6UWB1 636 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 G2E3Q7L622 706 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 MMD2Q8IY49 270 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 LYG1Q8N1E2 194 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 SYT2Q8N9I0 419 aaPredicted RBP2.92□□□□□ -1.94
SPG11-206ENST00000558093 OR6S1Q8NH40 331 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 AZIN2Q96A70 460 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 DGAT2Q96PD7 388 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 NUDT16L1Q9BRJ7 211 aaKnown RBP2.92□□□□□ -1.94
SPG11-206ENST00000558093 CDK19Q9BWU1 502 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 PRRG4Q9BZD6 226 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 ATP13A3Q9H7F0 1226 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 Q9N2K0 584 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 CHST11Q9NPF2 352 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 SPHK2Q9NRA0 654 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 ERAP1Q9NZ08 941 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 CRNNQ9UBG3 495 aaPredicted RBP2.92□□□□□ -1.94
SPG11-206ENST00000558093 FBXO2Q9UK22 296 aaPredicted RBP2.92□□□□□ -1.94
SPG11-206ENST00000558093 PPP2R2CQ9Y2T4 447 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 TRIM17Q9Y577 477 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 ANGPTL3Q9Y5C1 460 aa2.92□□□□□ -1.94
SPG11-206ENST00000558093 FEZF1A0PJY2 475 aa2.91□□□□□ -1.94
SPG11-206ENST00000558093 MSGN1A6NI15 193 aa2.91□□□□□ -1.94
SPG11-206ENST00000558093 KRTAP16-1A8MUX0 517 aa2.91□□□□□ -1.94
SPG11-206ENST00000558093 KPNA7A9QM74 516 aa2.91□□□□□ -1.94
SPG11-206ENST00000558093 ARPC2O15144 300 aa2.91□□□□□ -1.94
SPG11-206ENST00000558093 GLRA3O75311 464 aa2.91□□□□□ -1.94
SPG11-206ENST00000558093 LINGO3P0C6S8 592 aa2.91□□□□□ -1.94
SPG11-206ENST00000558093 SLC2A2P11168 524 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms