RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 KIR2DS3Q14952 304 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 C10orf62Q5T681 223 aaPredicted RBP12.03□□□□□ -0.48
TPM1-209ENST00000558072 THEMIS2Q5TEJ8 643 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 TMEM26Q6ZUK4 368 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 FRMD7Q6ZUT3 714 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 GATAD2AQ86YP4 633 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 NAGSQ8N159 534 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 TBC1D19Q8N5T2 526 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 GPR156Q8NFN8 814 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 OR52E1Q8NGJ3 308 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 OR6Y1Q8NGX8 325 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 OR4C6Q8NH72 309 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 SLC37A2Q8TED4 501 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 SAP25Q8TEE9 199 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 NAT6Q93015 286 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 CHMP6Q96FZ7 201 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 SLC38A3Q99624 504 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 CCT7Q99832 543 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 GATA5Q9BWX5 397 aaPredicted RBP12.03□□□□□ -0.48
TPM1-209ENST00000558072 PITPNM3Q9BZ71 974 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 PITHD1Q9GZP4 211 aaPredicted RBP12.03□□□□□ -0.48
TPM1-209ENST00000558072 C12orf65Q9H3J6 166 aaKnown RBP12.03□□□□□ -0.48
TPM1-209ENST00000558072 ZNF624Q9P2J8 865 aaPredicted RBP12.03□□□□□ -0.48
TPM1-209ENST00000558072 NCDNQ9UBB6 729 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 IKZF3Q9UKT9 509 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 HCN4Q9Y3Q4 1203 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 PCDHB11Q9Y5F2 797 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 CFAP20Q9Y6A4 193 aaKnown RBP12.03□□□□□ -0.48
TPM1-209ENST00000558072 GMNCA6NCL1 334 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 CRCPO75575 148 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 WDR47O94967 919 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 TGDSO95455 350 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 EML2O95834 649 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 ENO1P06733 434 aaKnown RBP12.02□□□□□ -0.49
TPM1-209ENST00000558072 VIMP08670 466 aaKnown RBP12.02□□□□□ -0.49
TPM1-209ENST00000558072 EBLN1P0CF75 366 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 MYF5P13349 255 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 GLB1P16278 677 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 GRK6P43250 576 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 HSPA7P48741 367 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 CCNG1P51959 295 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 ZNF33BQ06732 778 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 PCDH1Q08174 1060 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 CDC16Q13042 620 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 NAE1Q13564 534 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 GTF2H2Q13888 395 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 NR0B2Q15466 257 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 CLPPQ16740 277 aaPredicted RBP12.02□□□□□ -0.49
TPM1-209ENST00000558072 HIST2H2ACQ16777 129 aaPredicted RBP12.02□□□□□ -0.49
TPM1-209ENST00000558072 DEFB133Q30KQ1 61 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 PTCHD3Q3KNS1 767 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 PAGE2BQ5JRK9 111 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.02□□□□□ -0.49
TPM1-209ENST00000558072 HIST2H2AA3Q6FI13 130 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 GTF2H2CQ6P1K8 395 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 LCTLQ6UWM7 567 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 THOC6Q86W42 341 aaKnown RBP12.02□□□□□ -0.49
TPM1-209ENST00000558072 OOSP2Q86WS3 158 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 WDR75Q8IWA0 830 aaKnown RBP12.02□□□□□ -0.49
TPM1-209ENST00000558072 ARL14Q8N4G2 192 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 TEX9Q8N6V9 391 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 ZNF483Q8TF39 744 aaPredicted RBP12.02□□□□□ -0.49
TPM1-209ENST00000558072 ZNF480Q8WV37 535 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 UBE2E3Q969T4 207 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 MED8Q96G25 268 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 TMEM237Q96Q45 408 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 ZNF382Q96SR6 550 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 DPYSL5Q9BPU6 564 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 MECRQ9BV79 373 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 NTMT1Q9BV86 223 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 SGPP1Q9BX95 441 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 EHD1Q9H4M9 534 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 INTS7Q9NVH2 962 aaKnown RBP12.02□□□□□ -0.49
TPM1-209ENST00000558072 DNAAF2Q9NVR5 837 aaKnown RBP12.02□□□□□ -0.49
TPM1-209ENST00000558072 SCHIP1Q9P0W5 487 aaPredicted RBP12.02□□□□□ -0.49
TPM1-209ENST00000558072 VTI1BQ9UEU0 232 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 PCTPQ9UKL6 214 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 RAP2CQ9Y3L5 183 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 RALGAPA1Q6GYQ0 2036 aa12.02□□□□□ -0.49
TPM1-209ENST00000558072 PRAMEF33A0A0G2JMD5 474 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 LNP1A1A4G5 178 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 KRT87PA6NCN2 255 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 C2orf74A8MZ97 194 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 TCP11X1B4DZS4 312 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 E7ENX8 843 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 E2F3O00716 465 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 TAPBPO15533 448 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 FLRT2O43155 660 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 MAP3K7O43318 606 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 GDF9O60383 454 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 NOBOXO60393 691 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 SNNO75324 88 aaPredicted RBP12.01□□□□□ -0.49
TPM1-209ENST00000558072 TROVE2P10155 538 aaKnown RBP eCLIP12.01□□□□□ -0.49
TPM1-209ENST00000558072 AMD1P17707 334 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 LSP1P33241 339 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 GRK3P35626 688 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 HNF4AP41235 474 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 GPLD1P80108 840 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 TAP2Q03519 686 aa12.01□□□□□ -0.49
TPM1-209ENST00000558072 BST1Q10588 318 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms