RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 A6NNC1 897 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 USP27XA6NNY8 438 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 IDSB3KWA1 339 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 FFAR3O14843 346 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 GPR42O15529 346 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 CHRM5P08912 532 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-220ENST00000557037 CD46P15529 392 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 CD96P40200 585 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 KLK7P49862 253 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 POLR2FP61218 127 aaKnown RBP11.89□□□□□ -0.51
PSEN1-220ENST00000557037 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 FASTKQ14296 549 aaKnown RBP11.89□□□□□ -0.51
PSEN1-220ENST00000557037 SHEQ5VZ18 495 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 TIGD7Q6NT04 549 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-220ENST00000557037 HMBOX1Q6NT76 420 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 TMTC1Q8IUR5 882 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 DENND1AQ8TEH3 1009 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 SCMH1Q96GD3 660 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 GANQ9H2C0 597 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 MVB12BQ9H7P6 319 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 PCDH18Q9HCL0 1135 aa11.89□□□□□ -0.51
PSEN1-220ENST00000557037 STOX2Q9P2F5 926 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-220ENST00000557037 ZNF282Q9UDV7 671 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-220ENST00000557037 SCN2AQ99250 2005 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 GLYATL1P3A0A0U1RQE8 302 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 GOLGA6L4A6NEF3 574 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 ISM1B1AKI9 464 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 HAX1O00165 279 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 BUD23O43709 281 aaKnown RBP11.88□□□□□ -0.51
PSEN1-220ENST00000557037 MED26O95402 600 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 CCNCP24863 283 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 GRIA3P42263 894 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 JAM2P57087 298 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 GRM7Q14831 915 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 NOMO1Q15155 1222 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 PCBP2Q15366 365 aaKnown RBP eCLIP11.88□□□□□ -0.51
PSEN1-220ENST00000557037 ACER2Q5QJU3 275 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 TTC29Q8NA56 475 aaPredicted RBP11.88□□□□□ -0.51
PSEN1-220ENST00000557037 TMEM178AQ8NBL3 297 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 FAM98AQ8NCA5 519 aaKnown RBP11.88□□□□□ -0.51
PSEN1-220ENST00000557037 OR10Q1Q8NGQ4 319 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 UTP23Q9BRU9 249 aaKnown RBP11.88□□□□□ -0.51
PSEN1-220ENST00000557037 YIPF2Q9BWQ6 316 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 CEP41Q9BYV8 373 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 OR52A5Q9H2C5 316 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 ZNF304Q9HCX3 659 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 ZNF407Q9C0G0 2248 aa11.88□□□□□ -0.51
PSEN1-220ENST00000557037 PHF3Q92576 2039 aaKnown RBP11.87□□□□□ -0.51
PSEN1-220ENST00000557037 TMEM191CA6NGB0 347 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 TMCO5BA8MYB1 307 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 KCNK1O00180 336 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 IFRD1O00458 451 aaPredicted RBP11.87□□□□□ -0.51
PSEN1-220ENST00000557037 RASGRF2O14827 1237 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 SGTAO43765 313 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 CDC40O60508 579 aaKnown RBP eCLIP11.87□□□□□ -0.51
PSEN1-220ENST00000557037 CRLF1O75462 422 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 RARAP10276 462 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 MAGP20916 626 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 PDHA2P29803 388 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 DCAF7P61962 342 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 CBLBQ13191 982 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 BOP1Q14137 746 aaKnown RBP11.87□□□□□ -0.51
PSEN1-220ENST00000557037 IFI16Q16666 785 aaKnown RBP11.87□□□□□ -0.51
PSEN1-220ENST00000557037 TPD52L1Q16890 204 aaPredicted RBP11.87□□□□□ -0.51
PSEN1-220ENST00000557037 Q5PR19 223 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 CCDC122Q5T0U0 273 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 YOD1Q5VVQ6 348 aaPredicted RBP11.87□□□□□ -0.51
PSEN1-220ENST00000557037 FBXW10Q5XX13 1052 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 CNTD1Q8N815 330 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 HM13Q8TCT9 377 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 TMEM158Q8WZ71 300 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 TSGA13Q96PP4 275 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 TP63Q9H3D4 680 aaPredicted RBP11.87□□□□□ -0.51
PSEN1-220ENST00000557037 PARVAQ9NVD7 372 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 IL1RAPL1Q9NZN1 696 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 MKL2Q9ULH7 1088 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 PLAGL1Q9UM63 463 aa11.87□□□□□ -0.51
PSEN1-220ENST00000557037 A0A1W2PQ72 361 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 RCCD1A6NED2 376 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 GAPDHSO14556 408 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-220ENST00000557037 EPHB6O15197 1021 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 ARHGEF9O43307 516 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 MAN1A2O60476 641 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 SP1P08047 785 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 PEBP1P30086 187 aaKnown RBP11.86□□□□□ -0.51
PSEN1-220ENST00000557037 SHMT2P34897 504 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 HMGCLP35914 325 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 AP2B1P63010 937 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 OC90Q02509 493 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-220ENST00000557037 ZBTB17Q13105 803 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 KRT81Q14533 505 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 MAPKAPK3Q16644 382 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 BCL7AQ4VC05 210 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 BOLA3Q53S33 107 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 LIX1LQ8IVB5 337 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 CCNYQ8ND76 341 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 OR5AR1Q8NGP9 310 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 TFGQ92734 400 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-220ENST00000557037 IMMP1LQ96LU5 166 aa11.86□□□□□ -0.51
PSEN1-220ENST00000557037 ZNF354BQ96LW1 612 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms