RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PRSS56P0CW18 603 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 COX6B1P14854 86 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 HTR1EP28566 365 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 RAB28P51157 221 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 ZNF75DP51815 510 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 ITIH4Q14624 930 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 ZNF630Q2M218 657 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-221ENST00000556571 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.38□□□□□ -0.59
ACTN1-221ENST00000556571 FAM214AQ32MH5 1076 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 SYTL3Q4VX76 610 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 DNAJC21Q5F1R6 531 aaKnown RBP11.38□□□□□ -0.59
ACTN1-221ENST00000556571 CCDC181Q5TID7 509 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 TMEM207Q6UWW9 146 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 GFRALQ6UXV0 394 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 RPTNQ6XPR3 784 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 BNC2Q6ZN30 1099 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-221ENST00000556571 MRGPRGQ86SM5 289 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 FAM20CQ8IXL6 584 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 KBTBD2Q8IY47 623 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 ZNF808Q8N4W9 903 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-221ENST00000556571 TTC29Q8NA56 475 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-221ENST00000556571 CCDC110Q8TBZ0 833 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-221ENST00000556571 CDKN2AIPNLQ96HQ2 116 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 MRFAP1L1Q96HT8 127 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 TAAR6Q96RI8 345 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 CHP1Q99653 195 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 CRB3Q9BUF7 120 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 HEMGNQ9BXL5 484 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 NHEJ1Q9H9Q4 299 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-221ENST00000556571 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-221ENST00000556571 CTSFQ9UBX1 484 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 PRSS21Q9Y6M0 314 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 PCNX1Q96RV3 2341 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 CSMD2Q7Z408 3487 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 CELSR1Q9NYQ6 3014 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 TRGV8A0A0C4DH27 118 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 FITM1A5D6W6 292 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 CCL21O00585 134 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 MAP2K7O14733 419 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 S1PR4O95977 384 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 ACPPP15309 386 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 CD9P21926 228 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 FDXRP22570 491 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 MCM3P25205 808 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 PKLRP30613 574 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 GRIA3P42263 894 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 OR1D4P47884 311 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 TNFSF10P50591 281 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 OCA2Q04671 838 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 TBX2Q13207 712 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-221ENST00000556571 SPARCL1Q14515 664 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 VWA2Q5GFL6 755 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 FIGLAQ6QHK4 219 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 PACS1Q6VY07 963 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 CDKL3Q8IVW4 592 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-221ENST00000556571 LINC01555Q8NAE3 123 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 STYXQ8WUJ0 223 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 HAS2Q92819 552 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 CCDC120Q96HB5 630 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 SPATA13Q96N96 652 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 ZNF285Q96NJ3 590 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 ALS2CR12Q96Q35 445 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 SELENOSQ9BQE4 189 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 ZNF160Q9HCG1 818 aa11.37□□□□□ -0.59
ACTN1-221ENST00000556571 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.37□□□□□ -0.59
ACTN1-221ENST00000556571 GOLGA6L6A8MZA4 724 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 F8W8V4 182 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 KCNN4O15554 427 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 SRPX2O60687 465 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-221ENST00000556571 UNC5CO95185 931 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 FKBP9O95302 570 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 IPO7O95373 1038 aaKnown RBP11.36□□□□□ -0.59
ACTN1-221ENST00000556571 CRYABP02511 175 aaKnown RBP11.36□□□□□ -0.59
ACTN1-221ENST00000556571 RPN2P04844 631 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 SNRPB2P08579 225 aaKnown RBP11.36□□□□□ -0.59
ACTN1-221ENST00000556571 OR56A5P0C7T3 313 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 RBP3P10745 1247 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 SOX11P35716 441 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 HADHBP55084 474 aaKnown RBP11.36□□□□□ -0.59
ACTN1-221ENST00000556571 COPS2P61201 443 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 KLC1Q07866 573 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 SPA17Q15506 151 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 SF1Q15637 639 aaKnown RBP11.36□□□□□ -0.59
ACTN1-221ENST00000556571 ATG9BQ674R7 924 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 DARS2Q6PI48 645 aaKnown RBP11.36□□□□□ -0.59
ACTN1-221ENST00000556571 NAPRTQ6XQN6 538 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 MICALCLQ6ZW33 695 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 NDUFAF7Q7L592 441 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 NLRP9Q7RTR0 991 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 GAS2L3Q86XJ1 694 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 KLHDC8BQ8IXV7 354 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 DNAJB8Q8NHS0 232 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 ACTL9Q8TC94 416 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 STT3BQ8TCJ2 826 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 ZUFSPQ96AP4 578 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 MIEF2Q96C03 454 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 ZNF304Q9HCX3 659 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 PLA2G3Q9NZ20 509 aa11.36□□□□□ -0.59
ACTN1-221ENST00000556571 ABI3Q9P2A4 366 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms