RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 ADH1BP00325 375 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 SLC6A2P23975 617 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 TNFRSF4P43489 277 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 MRPL19P49406 292 aaKnown RBP17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 FGL2Q14314 439 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 STARD3Q14849 445 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 C11orf96Q7Z7L8 435 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 SYTL1Q8IYJ3 562 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 L3MBTL4Q8NA19 623 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 PHC3Q8NDX5 983 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 OR14C36Q8NHC7 312 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 COX14Q96I36 57 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 MSLNLQ96KJ4 702 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 TMEM74Q96NL1 305 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 C1orf109Q9NX04 203 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 SUCOQ9UBS9 1254 aaKnown RBP17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 EGFL7Q9UHF1 273 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 CFAP20Q9Y6A4 193 aaKnown RBP17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 TICRRQ7Z2Z1 1910 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 VEGFDO43915 354 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 EEDO75530 441 aaKnown RBP17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 IGFBP4P22692 258 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 MAT2AP31153 395 aaKnown RBP17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 CTHP32929 405 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 IER5LQ5T953 404 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 ZNF776Q68DI1 518 aaPredicted RBP17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 CWF19L1Q69YN2 538 aaKnown RBP17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 IFNEQ86WN2 208 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 CHCHD4Q8N4Q1 142 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 MINDY1Q8N5J2 469 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 C2orf73Q8N5S3 287 aaPredicted RBP17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 OR2L2Q8NH16 312 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 ATL1Q8WXF7 558 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 MTERF1Q99551 399 aaKnown RBP17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 MYOCQ99972 504 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 PIF1Q9H611 641 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 LEF1Q9UJU2 399 aaPredicted RBP17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 DLGAP4Q9Y2H0 992 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 TRPM6Q9BX84 2022 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 DOCK9Q9BZ29 2069 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 LINGO3P0C6S8 592 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 COL9A1P20849 921 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 NTSR1P30989 418 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 DOC2AQ14183 400 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 TBC1D25Q3MII6 688 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 C6orf10Q5SRN2 563 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 CACHD1Q5VU97 1274 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 FRG2Q64ET8 278 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 ADNP2Q6IQ32 1131 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 ADAMTSL4Q6UY14 1074 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 IL17RCQ8NAC3 791 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 ZNF480Q8WV37 535 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 APIPQ96GX9 242 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 ZNF514Q96K75 400 aaPredicted RBP17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 FRG2BQ96QU4 278 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 NRTNQ99748 197 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 PLAGL1Q9UM63 463 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 GPR34Q9UPC5 381 aa17.77■□□□□ 0.44
SDR39U1-220ENST00000556548 MGAT4DA6NG13 374 aa17.77■□□□□ 0.43
SDR39U1-220ENST00000556548 ADAM23O75077 832 aa17.77■□□□□ 0.43
SDR39U1-220ENST00000556548 KLF8O95600 359 aaPredicted RBP17.77■□□□□ 0.43
SDR39U1-220ENST00000556548 BCKDHAP12694 445 aa17.77■□□□□ 0.43
SDR39U1-220ENST00000556548 VARSP26640 1264 aaKnown RBP17.77■□□□□ 0.43
SDR39U1-220ENST00000556548 IRF4Q15306 451 aa17.77■□□□□ 0.43
SDR39U1-220ENST00000556548 GGTA1PQ4G0N0 100 aa17.77■□□□□ 0.43
SDR39U1-220ENST00000556548 COL13A1Q5TAT6 717 aaPredicted RBP17.77■□□□□ 0.43
SDR39U1-220ENST00000556548 OR2T3Q8NH03 318 aa17.77■□□□□ 0.43
SDR39U1-220ENST00000556548 NAF1Q96HR8 494 aaKnown RBP17.77■□□□□ 0.43
SDR39U1-220ENST00000556548 DPY30Q9C005 99 aa17.77■□□□□ 0.43
SDR39U1-220ENST00000556548 MRPL40Q9NQ50 206 aaKnown RBP17.77■□□□□ 0.43
SDR39U1-220ENST00000556548 EIF4E1BA6NMX2 242 aaKnown RBP17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 JUPP14923 745 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 PEX2P28328 305 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 ROR2Q01974 943 aaKnown RBP17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 KIAA0040Q15053 153 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 SF1Q15637 639 aaKnown RBP17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 TRIP10Q15642 601 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 SDE2Q6IQ49 451 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 FAM124AQ86V42 546 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 SMRP1Q8NCR6 262 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 HM13Q8TCT9 377 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 TSPEARQ8WU66 669 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 LINC00615Q96LM1 132 aaPredicted RBP17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 COPS7BQ9H9Q2 264 aaPredicted RBP17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 FZD3Q9NPG1 666 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 EPS15L1Q9UBC2 864 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 BCAP29Q9UHQ4 241 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 MTCH2Q9Y6C9 303 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 IFRD1O00458 451 aaPredicted RBP17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 AP1G1O43747 822 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 HOXB2P14652 356 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 JAK1P23458 1154 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 RPL10P27635 214 aaKnown RBP17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 MAD2L1Q13257 205 aaPredicted RBP17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 FAM174BQ3ZCQ3 159 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 USP39Q53GS9 565 aaKnown RBP17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 COQ5Q5HYK3 327 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 IZUMO2Q6UXV1 221 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 AMZ2Q86W34 360 aa17.76■□□□□ 0.43
SDR39U1-220ENST00000556548 KIAA2013Q8IYS2 634 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms