RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 VAPBO95292 243 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 C1orf105O95561 183 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 UMODP07911 640 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 GP1BBP13224 206 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 GCGRP47871 477 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 EIF3BP55884 814 aaKnown RBP21.69■■□□□ 1.06
ACTN1-220ENST00000556433 PPP1R32Q7Z5V6 425 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 SDCCAG8Q86SQ7 713 aaPredicted RBP21.69■■□□□ 1.06
ACTN1-220ENST00000556433 TMEM151BQ8IW70 566 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 GALNT16Q8N428 558 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 PNPLA2Q96AD5 504 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 ZUFSPQ96AP4 578 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 MFSD3Q96ES6 412 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 PSMG3-AS1Q96PY0 264 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 KIFC1Q9BW19 673 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 RAB11FIP5Q9BXF6 653 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 SYBUQ9NX95 663 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 MAP10Q9P2G4 905 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 NFS1Q9Y697 457 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 A0A1B0GX78 115 aa21.68■■□□□ 1.06
ACTN1-220ENST00000556433 PRICKLE3O43900 615 aaPredicted RBP21.68■■□□□ 1.06
ACTN1-220ENST00000556433 PIM1P11309 404 aaPredicted RBP21.68■■□□□ 1.06
ACTN1-220ENST00000556433 FMO4P31512 558 aa21.68■■□□□ 1.06
ACTN1-220ENST00000556433 BDKRB1P46663 353 aa21.68■■□□□ 1.06
ACTN1-220ENST00000556433 CYP2A13Q16696 494 aa21.68■■□□□ 1.06
ACTN1-220ENST00000556433 KCTD19Q17RG1 926 aaPredicted RBP21.68■■□□□ 1.06
ACTN1-220ENST00000556433 CCSMST1Q4G0I0 132 aa21.68■■□□□ 1.06
ACTN1-220ENST00000556433 PRR30Q53SZ7 412 aaPredicted RBP21.68■■□□□ 1.06
ACTN1-220ENST00000556433 FHL5Q5TD97 284 aa21.68■■□□□ 1.06
ACTN1-220ENST00000556433 LRRC8BQ6P9F7 803 aa21.68■■□□□ 1.06
ACTN1-220ENST00000556433 ZNF662Q6ZS27 426 aa21.68■■□□□ 1.06
ACTN1-220ENST00000556433 RAB42Q8N4Z0 105 aa21.68■■□□□ 1.06
ACTN1-220ENST00000556433 FOPNLQ96NB1 174 aa21.68■■□□□ 1.06
ACTN1-220ENST00000556433 MRM3Q9HC36 420 aaKnown RBP21.68■■□□□ 1.06
ACTN1-220ENST00000556433 LRRC4CQ9HCJ2 640 aa21.68■■□□□ 1.06
ACTN1-220ENST00000556433 CUTCQ9NTM9 273 aa21.68■■□□□ 1.06
ACTN1-220ENST00000556433 RUVBL2Q9Y230 463 aaKnown RBP21.68■■□□□ 1.06
ACTN1-220ENST00000556433 MRFAP1Q9Y605 127 aa21.68■■□□□ 1.06
ACTN1-220ENST00000556433 TARM1B6A8C7 271 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 GOLGA8KD6RF30 607 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 GOLGA8TH3BQL2 631 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 MASP2O00187 686 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 CEP104O60308 925 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 KLHL41O60662 606 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 FKBP9O95302 570 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 CCDC175P0C221 793 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 ITGAXP20702 1163 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 MCM3P25205 808 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 ARNTP27540 789 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 TERF1P54274 439 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 CDK16Q00536 496 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 GRM7Q14831 915 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 MYBPC3Q14896 1274 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 PLEKHN1Q494U1 663 aaPredicted RBP21.67■■□□□ 1.06
ACTN1-220ENST00000556433 TCTE1Q5JU00 501 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 CTSL3PQ5NE16 218 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 MRNIPQ6NTE8 343 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 OVCH1Q7RTY7 1134 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 BIRC8Q96P09 236 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 SELENOSQ9BQE4 189 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 ATP13A2Q9NQ11 1180 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 HOMER3Q9NSC5 361 aa21.67■■□□□ 1.06
ACTN1-220ENST00000556433 SPENQ96T58 3664 aaKnown RBP21.66■■□□□ 1.06
ACTN1-220ENST00000556433 TCRBV7S3A2A0A539 114 aa21.66■■□□□ 1.06
ACTN1-220ENST00000556433 DSCR3O14972 297 aa21.66■■□□□ 1.06
ACTN1-220ENST00000556433 AGFG2O95081 481 aa21.66■■□□□ 1.06
ACTN1-220ENST00000556433 ALPPP05187 535 aa21.66■■□□□ 1.06
ACTN1-220ENST00000556433 TPSB2P20231 275 aa21.66■■□□□ 1.06
ACTN1-220ENST00000556433 VARSP26640 1264 aaKnown RBP21.66■■□□□ 1.06
ACTN1-220ENST00000556433 CCNFP41002 786 aa21.66■■□□□ 1.06
ACTN1-220ENST00000556433 TRIP13Q15645 432 aaPredicted RBP21.66■■□□□ 1.06
ACTN1-220ENST00000556433 TPSAB1Q15661 275 aa21.66■■□□□ 1.06
ACTN1-220ENST00000556433 YOD1Q5VVQ6 348 aaPredicted RBP21.66■■□□□ 1.06
ACTN1-220ENST00000556433 CNSTQ6PJW8 725 aa21.66■■□□□ 1.06
ACTN1-220ENST00000556433 TTC29Q8NA56 475 aaPredicted RBP21.66■■□□□ 1.06
ACTN1-220ENST00000556433 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.66■■□□□ 1.06
ACTN1-220ENST00000556433 FKBP10Q96AY3 582 aa21.66■■□□□ 1.06
ACTN1-220ENST00000556433 MIPEPQ99797 713 aa21.66■■□□□ 1.06
ACTN1-220ENST00000556433 ZNF552Q9H707 407 aaPredicted RBP21.66■■□□□ 1.06
ACTN1-220ENST00000556433 TSR3Q9UJK0 312 aaKnown RBP21.66■■□□□ 1.06
ACTN1-220ENST00000556433 SOX13Q9UN79 622 aa21.66■■□□□ 1.06
ACTN1-220ENST00000556433 ANKRD12Q6UB98 2062 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 USP9XQ93008 2570 aaPredicted RBP21.65■■□□□ 1.06
ACTN1-220ENST00000556433 KRT87PA6NCN2 255 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 AGPSO00116 658 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 PFDN6O15212 129 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 ONECUT2O95948 504 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 ALBP02768 609 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 PSMB5P28074 263 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 CXCR5P32302 372 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 NKG7Q16617 165 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 FAM214AQ32MH5 1076 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 TRIM58Q8NG06 486 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 MAGEC3Q8TD91 643 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 LPGAT1Q92604 370 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 FAM136AQ96C01 138 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 ZNF285Q96NJ3 590 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 TCF12Q99081 682 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 CDC23Q9UJX2 597 aa21.65■■□□□ 1.06
ACTN1-220ENST00000556433 CRYL1Q9Y2S2 319 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms