RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 TFDP2Q14188 446 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 GPR33Q49SQ1 333 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 ZC3H12BQ5HYM0 836 aaKnown RBP13.31□□□□□ -0.28
ACTN1-219ENST00000556432 ABHD17BQ5VST6 288 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 HIBCHQ6NVY1 386 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-219ENST00000556432 NDUFAF7Q7L592 441 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 SERPINA9Q86WD7 417 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 OR5K2Q8NHB8 316 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 STT3BQ8TCJ2 826 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 HAUS1Q96CS2 278 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 NAP1L5Q96NT1 182 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-219ENST00000556432 SPOCK3Q9BQ16 436 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 YIPF2Q9BWQ6 316 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 SMARCAL1Q9NZC9 954 aa13.31□□□□□ -0.28
ACTN1-219ENST00000556432 ZNF282Q9UDV7 671 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-219ENST00000556432 IGLV3-16A0A075B6K0 115 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 A0A1B0GTH6 734 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 AGAP14A8MT82 685 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 CST8O60676 142 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 ANXA9O76027 345 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 BMP10O95393 424 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 AP2A1O95782 977 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 SERPINC1P01008 464 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 GSTM1P09488 218 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 TPBGLP0DKB5 382 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 COX6A1P12074 109 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 ZNF140P52738 457 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-219ENST00000556432 CSNK1G2P78368 415 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 GSTM4Q03013 218 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 OLIG2Q13516 323 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 LONRF1Q17RB8 773 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 FAM214AQ32MH5 1076 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 FIGNQ5HY92 759 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 MFSD7Q6UXD7 560 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 NAPRTQ6XQN6 538 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 MMP21Q8N119 569 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.3□□□□□ -0.28
ACTN1-219ENST00000556432 PSMF1Q92530 271 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 P3H4Q92791 437 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 ANP32EQ9BTT0 268 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 TSPAN10Q9H1Z9 355 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-219ENST00000556432 ZNF304Q9HCX3 659 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 DDX56Q9NY93 547 aaKnown RBP13.3□□□□□ -0.28
ACTN1-219ENST00000556432 CIDEBQ9UHD4 219 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 TRHDEQ9UKU6 1024 aa13.3□□□□□ -0.28
ACTN1-219ENST00000556432 OR5H15A6NDH6 313 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 MLYCDO95822 493 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 FTH1P02794 183 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 CELA2AP08217 269 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 PRSS56P0CW18 603 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 CD99P14209 185 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 FBLP22087 321 aaKnown RBP13.29□□□□□ -0.28
ACTN1-219ENST00000556432 ACADLP28330 430 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 PKLRP30613 574 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 ARHGAP25P42331 645 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 CSE1LP55060 971 aaKnown RBP13.29□□□□□ -0.28
ACTN1-219ENST00000556432 ZNF33BQ06732 778 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 SF1Q15637 639 aaKnown RBP13.29□□□□□ -0.28
ACTN1-219ENST00000556432 WASHC2DQ5SRD0 308 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 ATG9BQ674R7 924 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 FIGLAQ6QHK4 219 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 NCCRP1Q6ZVX7 275 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-219ENST00000556432 MICALCLQ6ZW33 695 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 TMTC1Q8IUR5 882 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 LMNTD1Q8N9Z9 388 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 ADAMTS18Q8TE60 1221 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 SLC22A18Q96BI1 424 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 DNAJC1Q96KC8 554 aaKnown RBP13.29□□□□□ -0.28
ACTN1-219ENST00000556432 QKIQ96PU8 341 aaKnown RBP eCLIP13.29□□□□□ -0.28
ACTN1-219ENST00000556432 GBA3Q9H227 469 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 LMBRD1Q9NUN5 540 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 RIC8BQ9NVN3 520 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 MEMO1Q9Y316 297 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 PCDHGB6Q9Y5F9 930 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 FAM169AQ9Y6X4 670 aa13.29□□□□□ -0.28
ACTN1-219ENST00000556432 NCOA6Q14686 2063 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-219ENST00000556432 HYKKA2RU49 373 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 SMTNL1A8MU46 457 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 WISP2O76076 250 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 AP2A2O94973 939 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 EIF2S1P05198 315 aaKnown RBP13.28□□□□□ -0.28
ACTN1-219ENST00000556432 ERVK-10P10266 1014 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 ITGAMP11215 1152 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 ABOP16442 354 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 EMP2P54851 167 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 ZBED6P86452 979 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 TYRO3Q06418 890 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 PRPSAP1Q14558 356 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 ZNF766Q5HY98 468 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 ITPRIPL1Q6GPH6 555 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 RIPOR1Q6ZS17 1223 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 NEK10Q6ZWH5 1172 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 SPPL2CQ8IUH8 684 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 CCDC50Q8IVM0 306 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 CA5BP1Q8WTZ4 195 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 RNF32Q9H0A6 362 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 LUC7LQ9NQ29 371 aaKnown RBP13.28□□□□□ -0.28
ACTN1-219ENST00000556432 IMPACTQ9P2X3 320 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 TEKT2Q9UIF3 430 aa13.28□□□□□ -0.28
ACTN1-219ENST00000556432 HYOU1Q9Y4L1 999 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms