RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 KLHL25Q9H0H3 589 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 DPH5Q9H2P9 285 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 FAM114A2Q9NRY5 505 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 CIDEBQ9UHD4 219 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 CDC23Q9UJX2 597 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 DHRS7Q9Y394 339 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 CFAP46Q8IYW2 2715 aa11.13□□□□□ -0.63
SLIRP-205ENST00000556310 FER1L5A0AVI2 2057 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 ZNF891A8MT65 544 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-205ENST00000556310 TMEM150CB9EJG8 249 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 RNF223E7ERA6 249 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 FKBP9O95302 570 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 MPC1LP0DKB6 136 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 CBSLP0DN79 551 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 ERGP11308 486 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 GABRB3P28472 473 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 CBSP35520 551 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 CARSP49589 748 aaKnown RBP11.12□□□□□ -0.63
SLIRP-205ENST00000556310 CUL1Q13616 776 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 FASTKD3Q14CZ7 662 aaKnown RBP11.12□□□□□ -0.63
SLIRP-205ENST00000556310 ZIC1Q15915 447 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 CCSMST1Q4G0I0 132 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 SOWAHCQ53LP3 525 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-205ENST00000556310 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.12□□□□□ -0.63
SLIRP-205ENST00000556310 TEDDM1Q5T9Z0 273 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 DUPD1Q68J44 220 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 LRRC8EQ6NSJ5 796 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 UGT3A1Q6NUS8 523 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 TRMT10BQ6PF06 316 aaKnown RBP11.12□□□□□ -0.63
SLIRP-205ENST00000556310 CDHR3Q6ZTQ4 885 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 TAX1BP1Q86VP1 789 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 ANKMY2Q8IV38 441 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 FBXO15Q8NCQ5 510 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-205ENST00000556310 LSM14AQ8ND56 463 aaKnown RBP11.12□□□□□ -0.63
SLIRP-205ENST00000556310 FBXO36Q8NEA4 188 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 OR1L3Q8NH93 324 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 DENND1AQ8TEH3 1009 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 TTC9Q92623 222 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 INPP5DQ92835 1189 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 RNF31Q96EP0 1072 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 WBP1Q96G27 269 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 LRFN5Q96NI6 719 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 BBC3Q96PG8 261 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-205ENST00000556310 NDNQ99608 321 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 SLC12A9Q9BXP2 914 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 RAB17Q9H0T7 212 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 PPANQ9NQ55 473 aaKnown RBP11.12□□□□□ -0.63
SLIRP-205ENST00000556310 GRHL1Q9NZI5 618 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 PLA2G2EQ9NZK7 142 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 SLC17A6Q9P2U8 582 aa11.12□□□□□ -0.63
SLIRP-205ENST00000556310 TRMT6Q9UJA5 497 aaKnown RBP11.12□□□□□ -0.63
SLIRP-205ENST00000556310 CORO1CQ9ULV4 474 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-205ENST00000556310 UTP11Q9Y3A2 253 aaKnown RBP11.12□□□□□ -0.63
SLIRP-205ENST00000556310 PCM1Q15154 2024 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 KRT87PA6NCN2 255 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 C21orf140B9A014 251 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 MYO1CO00159 1063 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 TERTO14746 1132 aaKnown RBP11.11□□□□□ -0.63
SLIRP-205ENST00000556310 EIF3HO15372 352 aaKnown RBP eCLIP11.11□□□□□ -0.63
SLIRP-205ENST00000556310 PRICKLE3O43900 615 aaPredicted RBP11.11□□□□□ -0.63
SLIRP-205ENST00000556310 NTRK1P04629 796 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 ITGB2P05107 769 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 CYP2A7P20853 494 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 MAGP20916 626 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 OAS2P29728 719 aaKnown RBP11.11□□□□□ -0.63
SLIRP-205ENST00000556310 DLSTP36957 453 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 GABRA4P48169 554 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 ITGA1P56199 1179 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 MC1RQ01726 317 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 MGAT5Q09328 741 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 ARHGAP19Q14CB8 494 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 CYP2A13Q16696 494 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 WHAMMP3Q1A5X7 153 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 RBM20Q5T481 1227 aaKnown RBP11.11□□□□□ -0.63
SLIRP-205ENST00000556310 PCSK4Q6UW60 755 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 CPNE9Q8IYJ1 553 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 ZBED8Q8IZ13 594 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 C2orf73Q8N5S3 287 aaPredicted RBP11.11□□□□□ -0.63
SLIRP-205ENST00000556310 LMNTD1Q8N9Z9 388 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 OR9A1PQ8NGU1 263 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 STARD8Q92502 1023 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 PHACTR1Q9C0D0 580 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 FAM60AQ9NP50 221 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 LHX9Q9NQ69 397 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 INTS7Q9NVH2 962 aaKnown RBP11.11□□□□□ -0.63
SLIRP-205ENST00000556310 TAS2R13Q9NYV9 303 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 ZFATQ9P243 1243 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 IL17BQ9UHF5 180 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 SERTAD3Q9UJW9 196 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 CROTQ9UKG9 612 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 PADI1Q9ULC6 663 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 TLN1Q9Y490 2541 aaKnown RBP11.11□□□□□ -0.63
SLIRP-205ENST00000556310 SEC16AO15027 2179 aa11.11□□□□□ -0.63
SLIRP-205ENST00000556310 HEATR5BQ9P2D3 2071 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 ZNF839A8K0R7 811 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 E7EQ34 232 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 URI1O94763 535 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-205ENST00000556310 AHSGP02765 367 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 TUBB4AP04350 444 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 F8A1P23610 371 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms