RNA–Protein interactions for RNA: ENST00000556226.5

HNRNPC-224, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-224ENST00000556226 SLC39A10Q9ULF5 831 aa9.42□□□□□ -0.9
HNRNPC-224ENST00000556226 SNX7Q9UNH6 387 aa9.42□□□□□ -0.9
HNRNPC-224ENST00000556226 VPS9D1Q9Y2B5 631 aa9.42□□□□□ -0.9
HNRNPC-224ENST00000556226 PADI2Q9Y2J8 665 aa9.42□□□□□ -0.9
HNRNPC-224ENST00000556226 NEU2Q9Y3R4 380 aa9.42□□□□□ -0.9
HNRNPC-224ENST00000556226 FER1L5A0AVI2 2057 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 FAM237BA0A1B0GVD1 139 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 TCP11X1B4DZS4 312 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 TARM1B6A8C7 271 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 C9J4A7 227 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 PGRMC1O00264 195 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 CES2O00748 559 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 AVILO75366 819 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 CEACAM4O75871 244 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 MATN4O95460 622 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 C1orf105O95561 183 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 CAPN1P07384 714 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 COL8A1P27658 744 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 ATP5DP30049 168 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 PEBP1P30086 187 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 FMO4P31512 558 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 EIF3BP55884 814 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 NCF4Q15080 339 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 SF1Q15637 639 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 INPP5JQ15735 1006 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 ZC3H12BQ5HYM0 836 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 ZNF385CQ66K41 422 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 RHBDD2Q6NTF9 364 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 NEPROQ6NW34 567 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 JMJD6Q6NYC1 403 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 CASC4Q6P4E1 433 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 CES3Q6UWW8 571 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 MED25Q71SY5 747 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 TRIM73Q86UV7 250 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 CAND1Q86VP6 1230 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 LMNTD2Q8IXW0 634 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 OTUD6BQ8N6M0 293 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 ENDOVQ8N8Q3 282 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 LINC01555Q8NAE3 123 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 FDCSPQ8NFU4 85 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 HMGCLL1Q8TB92 370 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 PROKR1Q8TCW9 393 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 GRK7Q8WTQ7 553 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 LPGAT1Q92604 370 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 NUDT9Q9BW91 350 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 MFRPQ9BY79 579 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 SPRTNQ9H040 489 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 ACSS2Q9NR19 701 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 ENAMQ9NRM1 1142 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 INTS10Q9NVR2 710 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 PLAGL1Q9UM63 463 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 SRPK3Q9UPE1 567 aa9.41□□□□□ -0.9
HNRNPC-224ENST00000556226 GOLGA6L10A0A0M3HER8 536 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 ZSCAN9O15535 394 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 HCRTR1O43613 425 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 PRICKLE3O43900 615 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 SRPX2O60687 465 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 PIM1P11309 404 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 PKMP14618 531 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 CHRM3P20309 590 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 FNTAP49354 379 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 VPS41P49754 854 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 ARSFP54793 590 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 DCDP81605 110 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 DHX34Q14147 1143 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 GBX1Q14549 363 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 SSPNQ14714 243 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 EIF2S3LQ2VIR3 472 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 PTCHD3Q3KNS1 767 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 ANKRD20A4Q4UJ75 823 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 CTSL3PQ5NE16 218 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 YOD1Q5VVQ6 348 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 SLC6A19Q695T7 634 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 ZNF787Q6DD87 383 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 FAM198BQ6UWH4 519 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 CENPUQ71F23 418 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 CILP2Q8IUL8 1156 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 MCATQ8IVS2 390 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 REXO1L1PQ8IX06 675 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 RBMXL3Q8N7X1 1067 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 TMEM102Q8N9M5 508 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 LMNTD1Q8N9Z9 388 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 SKA2Q8WVK7 121 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 DLG3Q92796 817 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 C19orf60Q96EN9 201 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 IP6K3Q96PC2 410 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 OSBPL9Q96SU4 736 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 NDC1Q9BTX1 674 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 GRPEL1Q9HAV7 217 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 TXLNGQ9NUQ3 528 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 EURLQ9NYK6 297 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 KLHL42Q9P2K6 505 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 GPN3Q9UHW5 284 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 CRYL1Q9Y2S2 319 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 PCDHGB7Q9Y5F8 929 aa9.4□□□□□ -0.9
HNRNPC-224ENST00000556226 POLEQ07864 2286 aa9.39□□□□□ -0.91
HNRNPC-224ENST00000556226 A6NL46 340 aa9.39□□□□□ -0.91
HNRNPC-224ENST00000556226 GOLGA8KD6RF30 607 aa9.39□□□□□ -0.91
HNRNPC-224ENST00000556226 GOLGA8TH3BQL2 631 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms