RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 GUCA1CO95843 209 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 ACPPP15309 386 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 EPORP19235 508 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 FSTP19883 344 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 PRPH2P23942 346 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 VHLP40337 213 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 PTDSS1P48651 473 aaKnown RBP8.08□□□□□ -1.12
ATXN3-235ENST00000556082 MAD2L1Q13257 205 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-235ENST00000556082 CEACAM7Q14002 265 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 RCAN2Q14206 197 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 COL19A1Q14993 1142 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 KIF19Q2TAC6 998 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 MMEL1Q495T6 779 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 FBXO48Q5FWF7 155 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 ICE2Q659A1 982 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 REP15Q6BDI9 236 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 ZFP1Q6P2D0 407 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 PAOXQ6QHF9 649 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 ADAMTSL4Q6UY14 1074 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 DET1Q7L5Y6 550 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 HPS6Q86YV9 775 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 VRK3Q8IV63 474 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 SLC22A15Q8IZD6 547 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 SFRP1Q8N474 314 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 ZNF366Q8N895 744 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 L3MBTL4Q8NA19 623 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 NAT14Q8WUY8 206 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 FAM131CQ96AQ9 280 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 TMEM159Q96B96 161 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 NUS1Q96E22 293 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 CCDC138Q96M89 665 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 NPAS2Q99743 824 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 P2RY13Q9BPV8 354 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 TACO1Q9BSH4 297 aaKnown RBP8.08□□□□□ -1.12
ATXN3-235ENST00000556082 WRAP53Q9BUR4 548 aaKnown RBP8.08□□□□□ -1.12
ATXN3-235ENST00000556082 SPAG4Q9NPE6 437 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 GID8Q9NWU2 228 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 TMEM181Q9P2C4 612 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 EPS15L1Q9UBC2 864 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 SUCOQ9UBS9 1254 aaKnown RBP8.08□□□□□ -1.12
ATXN3-235ENST00000556082 CD300AQ9UGN4 299 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 CROTQ9UKG9 612 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 BTRCQ9Y297 605 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 C15orf41Q9Y2V0 281 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 RAXQ9Y2V3 346 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 PTGDR2Q9Y5Y4 395 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 STON1Q9Y6Q2 735 aa8.08□□□□□ -1.12
ATXN3-235ENST00000556082 KIF26AQ9ULI4 1882 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-235ENST00000556082 KCNE1BA0A087WTH5 132 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 KLHL33A6NCF5 533 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 PABPN1LA6NDY0 278 aaKnown RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 GPR89AB7ZAQ6 455 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 ANHXE9PGG2 379 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 H0Y3Z8 333 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 RFXAPO00287 272 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 ACOT8O14734 319 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 ANKRD28O15084 1053 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 ANGPT2O15123 496 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 RNASEH1O60930 286 aaKnown RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 EEDO75530 441 aaKnown RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 PDE5AO76074 875 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 ALX3O95076 343 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 KRT6AP02538 564 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 CATP04040 527 aaKnown RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 KRT6BP04259 564 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 EPHX1P07099 455 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 GPR89BP0CG08 455 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 C6P13671 934 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 ANPEPP15144 967 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 C5AR1P21730 350 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 JAK1P23458 1154 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 MAP4P27816 1152 aaKnown RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 HMOX2P30519 316 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 GDI1P31150 447 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 P2RY2P41231 377 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 DPP6P42658 865 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 GDF5P43026 501 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 GNPDA1P46926 289 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 KRT6CP48668 564 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 THOP1P52888 689 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 METAP1P53582 386 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 CTSCP53634 463 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 DIO3P55073 304 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 CNTN1Q12860 1018 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 BOP1Q14137 746 aaKnown RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 E2F2Q14209 437 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 TRIM25Q14258 630 aaKnown RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 GRM2Q14416 872 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 ABRAXAS2Q15018 415 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 CCDC6Q16204 474 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 ZXDCQ2QGD7 858 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 AP5B1Q2VPB7 878 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 POM121L1PQ3SYA9 428 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 SAMD4BQ5PRF9 694 aaKnown RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 PIP5KL1Q5T9C9 394 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 IRAK1BP1Q5VVH5 260 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 EGFLAMQ63HQ2 1017 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 TMEM220Q6QAJ8 160 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 IL27RAQ6UWB1 636 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 PARM1Q6UWI2 310 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms