RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 SAP25Q8TEE9 199 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 CKAP2Q8WWK9 683 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 ATG10Q9H0Y0 220 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 THAP1Q9NVV9 213 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 FAM53CQ9NYF3 392 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 GPRC5BQ9NZH0 403 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 FTSJ1Q9UET6 329 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 PTBP2Q9UKA9 531 aaKnown RBP10.86□□□□□ -0.67
SHMT2-220ENST00000555634 IKZF3Q9UKT9 509 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 PLAGL1Q9UM63 463 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 PCDHB11Q9Y5F2 797 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 TRBV23OR9-2A0A075B6M9 112 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 PIPSLA2A3N6 862 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 ISM1B1AKI9 464 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 EML2O95834 649 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 FGF3P11487 239 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-220ENST00000555634 MTHFD2P13995 350 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 CMPK1P30085 196 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 GRK3P35626 688 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 GGT5P36269 586 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 SLC19A1P41440 591 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 GPR3P46089 330 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 SLC1A6P48664 564 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 PKNOX1P55347 436 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 MAZP56270 477 aaKnown RBP10.85□□□□□ -0.67
SHMT2-220ENST00000555634 ABCE1P61221 599 aaKnown RBP10.85□□□□□ -0.67
SHMT2-220ENST00000555634 GPLD1P80108 840 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 BNC1Q01954 994 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 CLCQ05315 142 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 SPEM2Q0P670 501 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 BNIP3Q12983 259 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 NAE1Q13564 534 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 MPP2Q14168 576 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 KIR2DS3Q14952 304 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 HIST2H2ACQ16777 129 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-220ENST00000555634 PTCHD3Q3KNS1 767 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 HIST2H2AA3Q6FI13 130 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 TCEAL6Q6IPX3 200 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 THOC6Q86W42 341 aaKnown RBP10.85□□□□□ -0.67
SHMT2-220ENST00000555634 GATAD2AQ86YP4 633 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 ARL14Q8N4G2 192 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 CHCHD4Q8N4Q1 142 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 EID2Q8N6I1 236 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 SUMF1Q8NBK3 374 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 OR56A3Q8NH54 315 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 HMGCLL1Q8TB92 370 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 SETD7Q8WTS6 366 aaKnown RBP10.85□□□□□ -0.67
SHMT2-220ENST00000555634 ZNF480Q8WV37 535 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 CCT6BQ92526 530 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 TCEAL3Q969E4 200 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 REPS1Q96D71 796 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 FAR2Q96K12 515 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 C1QTNF3Q9BXJ4 246 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 ILKAPQ9H0C8 392 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-220ENST00000555634 CCDC134Q9H6E4 229 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 ACTR8Q9H981 624 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 SEMA4BQ9NPR2 832 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-220ENST00000555634 FSCN3Q9NQT6 498 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 SEMA4GQ9NTN9 838 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 DNAAF2Q9NVR5 837 aaKnown RBP10.85□□□□□ -0.67
SHMT2-220ENST00000555634 KCNK4Q9NYG8 393 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 SCHIP1Q9P0W5 487 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-220ENST00000555634 ZNF624Q9P2J8 865 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-220ENST00000555634 CIDEBQ9UHD4 219 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 PCTPQ9UKL6 214 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 ICKQ9UPZ9 632 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 ST14Q9Y5Y6 855 aa10.85□□□□□ -0.67
SHMT2-220ENST00000555634 TCP11X1B4DZS4 312 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 SLCO1B7G3V0H7 640 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 E2F3O00716 465 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 NOBOXO60393 691 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 UGDHO60701 494 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 UBXN7O94888 489 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 SIX3O95343 332 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-220ENST00000555634 ENO1P06733 434 aaKnown RBP10.84□□□□□ -0.67
SHMT2-220ENST00000555634 ERGP11308 486 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 HRH2P25021 359 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 CXCR2P25025 360 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 HMOX2P30519 316 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 CAPZBP47756 277 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 SLC6A12P48065 614 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 AGTR2P50052 363 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 ABATP80404 500 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 IRF8Q02556 426 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 GALNT1Q10472 559 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-220ENST00000555634 BST1Q10588 318 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 LAPTM5Q13571 262 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 CCSMST1Q4G0I0 132 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 TTC19Q6DKK2 380 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-220ENST00000555634 OGFOD3Q6PK18 319 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 LCTLQ6UWM7 567 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 XKR5Q6UX68 686 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 RGS9BPQ6ZS82 235 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 ZCCHC23Q6ZST2 131 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 GPRIN3Q6ZVF9 776 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 GOLGA7Q7Z5G4 137 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 ADCK2Q7Z695 626 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 RASGRP3Q8IV61 690 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 WDR75Q8IWA0 830 aaKnown RBP10.84□□□□□ -0.67
SHMT2-220ENST00000555634 KLHDC8AQ8IYD2 350 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms