RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 EBF4Q9BQW3 602 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 STN1Q9H668 368 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 ACTR8Q9H981 624 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 WASH6PQ9NQA3 447 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 SPATA7Q9P0W8 599 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 TAAR2Q9P1P5 351 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 HEY2Q9UBP5 337 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 DOLKQ9UPQ8 538 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 DYRK1BQ9Y463 629 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 TIMM22Q9Y584 194 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 TP53BP1Q12888 1972 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 ABCA7Q8IZY2 2146 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 GOLGA8QA0A0J9YX86 632 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 A0A1B0GTL3 188 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 A0A1B0GTW7 788 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 GOLGA8OA6NCC3 632 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 PRR5-ARHGAP8B1AHC4 643 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 GOLGA8NF8WBI6 632 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 VILLO15195 856 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 CLDN9O95484 217 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 CSF2P04141 144 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 ENO1P06733 434 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 CAPN1P07384 714 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 CELA2BP08218 269 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 EBLN1P0CF75 366 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 F3P13726 295 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 GNSP15586 552 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 NDUFS1P28331 727 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 AFF3P51826 1226 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 FOXA1P55317 472 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 IFT88Q13099 833 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 TRAF3Q13114 568 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 FASTKQ14296 549 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 ARHGAP19Q14CB8 494 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 ELOCQ15369 112 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 ZSCAN26Q16670 478 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 PLK5Q496M5 336 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 PRRT3Q5FWE3 981 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 FAM219BQ5XKK7 198 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 LETMD1Q6P1Q0 360 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 SUSD1Q6UWL2 747 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 DDIASQ8IXT1 998 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 C1orf216Q8TAB5 229 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 LMX1AQ8TE12 382 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 TWIST2Q8WVJ9 160 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 SH3KBP1Q96B97 665 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 NTMT1Q9BV86 223 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 LRRC61Q9BV99 259 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 RAB11FIP5Q9BXF6 653 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 NUSAP1Q9BXS6 441 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 WDR55Q9H6Y2 383 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 PRM3Q9NNZ6 103 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 PFDN4Q9NQP4 134 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 CCDC177Q9NQR7 707 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 INTS7Q9NVH2 962 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 SPASTQ9UBP0 616 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 TRPS1Q9UHF7 1281 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 ZNF225Q9UK10 706 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 PCOLCE2Q9UKZ9 415 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 BTRCQ9Y297 605 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 RNF11Q9Y3C5 154 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 PCDHGA10Q9Y5H3 936 aa9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 TDRD6O60522 2096 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-220ENST00000555585 TNRC6BQ9UPQ9 1833 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 CACNA1IQ9P0X4 2223 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 PRAMEF33A0A0G2JMD5 474 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 A0A1B0GVT2 93 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 A6NCN8 305 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 CCT8L1PA6NM43 557 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 OR5K4A6NMS3 321 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 B4DGG1 531 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 E7ENX8 843 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 SDHDO14521 159 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 FFAR3O14843 346 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 PIP5K1BO14986 540 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 GPR42O15529 346 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 GPR37L1O60883 481 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 VIPP01282 170 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 JUNP05412 331 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 SLC2A4P14672 509 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 NME1P15531 152 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 EPORP19235 508 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 CCND1P24385 295 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 EPHA3P29320 983 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 AVPR2P30518 371 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 SLC19A1P41440 591 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 HNRNPKP61978 463 aaKnown RBP eCLIP9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 IRF8Q02556 426 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 TAP2Q03519 686 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 CHIT1Q13231 466 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 CYP2A13Q16696 494 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 UGT3A2Q3SY77 523 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 XKR6Q5GH73 641 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 PRAMEF14Q5SWL7 426 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 PRAMEF13Q5VWM6 474 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 IYDQ6PHW0 289 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 SCIMPQ6UWF3 145 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 TRPM8Q7Z2W7 1104 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 BMP8AQ7Z5Y6 402 aa9.35□□□□□ -0.91
HNRNPC-220ENST00000555585 MTDHQ86UE4 582 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms