RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 CCND1P24385 295 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 ECHS1P30084 290 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 PKLRP30613 574 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 PDX1P52945 283 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 AP1S2P56377 157 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 ATP6V0D1P61421 351 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 SF1Q15637 639 aaKnown RBP10.25□□□□□ -0.77
TMEM260-206ENST00000555046 CYP2A13Q16696 494 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 SLC5A12Q1EHB4 618 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 RBM20Q5T481 1227 aaKnown RBP10.25□□□□□ -0.77
TMEM260-206ENST00000555046 SPESP1Q6UW49 350 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 CEACAM20Q6UY09 585 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 RAPH1Q70E73 1250 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 TMPRSS9Q7Z410 1059 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 FAM129CQ86XR2 697 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 RCBTB1Q8NDN9 531 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 JPH3Q8WXH2 748 aaPredicted RBP10.25□□□□□ -0.77
TMEM260-206ENST00000555046 SMPDL3AQ92484 453 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 N4BP2L2Q92802 583 aaPredicted RBP10.25□□□□□ -0.77
TMEM260-206ENST00000555046 ZUFSPQ96AP4 578 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 LINGO1Q96FE5 620 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 TCTN2Q96GX1 697 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 SLC41A2Q96JW4 573 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 GPR22Q99680 433 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 MAP3K3Q99759 626 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 MCMBPQ9BTE3 642 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 DDA1Q9BW61 102 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 CHRNA10Q9GZZ6 450 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 PCBD2Q9H0N5 130 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 CDC42EP4Q9H3Q1 356 aaKnown RBP10.25□□□□□ -0.77
TMEM260-206ENST00000555046 XKR8Q9H6D3 395 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 PPCSQ9HAB8 311 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 FANCEQ9HB96 536 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 SMYD2Q9NRG4 433 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 TMEM9Q9P0T7 183 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.25□□□□□ -0.77
TMEM260-206ENST00000555046 PISDQ9UG56 409 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 SERTAD3Q9UJW9 196 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 ICKQ9UPZ9 632 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 MTO1Q9Y2Z2 717 aaKnown RBP10.25□□□□□ -0.77
TMEM260-206ENST00000555046 PCDHGA3Q9Y5H0 932 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 NFS1Q9Y697 457 aa10.25□□□□□ -0.77
TMEM260-206ENST00000555046 UNC13CQ8NB66 2214 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 TARM1B6A8C7 271 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 BTN3A1O00481 513 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 BRINP1O60477 761 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 CCNDBP1O95273 360 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 FGF3P11487 239 aaPredicted RBP10.24□□□□□ -0.77
TMEM260-206ENST00000555046 ZNF37AP17032 561 aaPredicted RBP10.24□□□□□ -0.77
TMEM260-206ENST00000555046 HRH2P25021 359 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 OAS2P29728 719 aaKnown RBP10.24□□□□□ -0.77
TMEM260-206ENST00000555046 SEPHS1P49903 392 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 KPNA2P52292 529 aaKnown RBP10.24□□□□□ -0.77
TMEM260-206ENST00000555046 MAPK10P53779 464 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 GFERP55789 205 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 TAS2R39P59534 338 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 RAB10P61026 200 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 TIAL1Q01085 375 aaKnown RBP eCLIP10.24□□□□□ -0.77
TMEM260-206ENST00000555046 FOXM1Q08050 763 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 C16orf72Q14CZ0 275 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 UAP1Q16222 522 aaPredicted RBP10.24□□□□□ -0.77
TMEM260-206ENST00000555046 TBC1D25Q3MII6 688 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 FBXO38Q6PIJ6 1188 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 TBC1D1Q86TI0 1168 aaPredicted RBP10.24□□□□□ -0.77
TMEM260-206ENST00000555046 MARCH9Q86YJ5 346 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 D2HGDHQ8N465 521 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 GIMAP7Q8NHV1 300 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 DENND1AQ8TEH3 1009 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 OR2A14Q96R47 310 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 SLC30A3Q99726 388 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 PITPNM3Q9BZ71 974 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 SOHLH2Q9NX45 425 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 SLC17A6Q9P2U8 582 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 CTNNAL1Q9UBT7 734 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 FETUBQ9UGM5 382 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 ZNF180Q9UJW8 692 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 ITPR2Q14571 2701 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 RP1P56715 2156 aa10.24□□□□□ -0.77
TMEM260-206ENST00000555046 SCN8AQ9UQD0 1980 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 A0A087X1B8 175 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 IGHV5-51A0A0C4DH38 117 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 A0A0J9YY10 115 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 SLC9B1P1A6NJY1 282 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 ARHGEF33A8MVX0 844 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 CDRT15L2A8MXV6 281 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 RIPK2O43353 540 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 KIF1CO43896 1103 aaKnown RBP10.23□□□□□ -0.77
TMEM260-206ENST00000555046 WISP1O95388 367 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 MSL3P1P0C860 447 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 UGT2B7P16662 529 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 TYK2P29597 1187 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 CMPK1P30085 196 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 RPA3P35244 121 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-206ENST00000555046 HNMTP50135 292 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 PNLIPRP1P54315 467 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 ABATP80404 500 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 TAF1BQ53T94 588 aaPredicted RBP10.23□□□□□ -0.77
TMEM260-206ENST00000555046 ZC3H12BQ5HYM0 836 aaKnown RBP10.23□□□□□ -0.77
TMEM260-206ENST00000555046 CDKL4Q5MAI5 379 aa10.23□□□□□ -0.77
TMEM260-206ENST00000555046 WDR93Q6P2C0 686 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms