RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 FAM76BQ5HYJ3 339 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 TMEM31Q5JXX7 168 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ADALQ6DHV7 355 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 RPUSD3Q6P087 351 aaKnown RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 GFRALQ6UXV0 394 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 COPS6Q7L5N1 327 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 C16orf82Q7Z2V1 217 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ATG9AQ7Z3C6 839 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CUZD1Q86UP6 607 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 SATL1Q86VE3 508 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 TMPRSS12Q86WS5 348 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 SFR1Q86XK3 245 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 GALNT13Q8IUC8 556 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 APOBEC3FQ8IUX4 373 aaKnown RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ODF3L1Q8IXM7 274 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 KCTD6Q8NC69 237 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CCDC191Q8NCU4 936 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 LILRB1Q8NHL6 650 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 PPP4R1Q8TF05 950 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 SLC38A5Q8WUX1 472 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 DNASE2BQ8WZ79 361 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 FIG4Q92562 907 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 BADQ92934 168 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 PTERQ96BW5 349 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 BICD1Q96G01 975 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ADGRG7Q96K78 797 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 PRMT6Q96LA8 375 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CCDC106Q9BWC9 280 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 PPIL3Q9H2H8 161 aaKnown RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 LRMDAQ9H2I8 198 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 PANK3Q9H999 370 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 TCP11L1Q9NUJ3 509 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 GDE1Q9NZC3 331 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 NFKBIL1Q9UBC1 381 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 MTUS1Q9ULD2 1270 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 TRPV2Q9Y5S1 764 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 RPS6KL1Q9Y6S9 549 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 A0A0G2JMZ2 1700 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 PLXNB2O15031 1838 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 DOCK2Q92608 1830 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CACNA1HO95180 2353 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 COL4A4P53420 1690 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 KIF7Q2M1P5 1343 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ZZEF1O43149 2961 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ZFYVE26Q68DK2 2539 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 RLFQ13129 1914 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 SAA2-SAA4A0A096LPE2 208 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 TCRBV21S2A2A0A5A6 115 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 OR5K3A6NET4 321 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 PLK4O00444 970 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 UBE2CO00762 179 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ACOT8O14734 319 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 IPO8O15397 1037 aaKnown RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 BUD23O43709 281 aaKnown RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 PRAMEF11O60813 436 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CREG1O75629 220 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 BBOX1O75936 387 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 GAS8-AS1O95177 125 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 MYOGP15173 224 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ITGA2P17301 1181 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 POLR2CP19387 275 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CAPZA2P47755 286 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ART1P52961 327 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 SNRPEP62304 92 aaKnown RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 EEF1A1P68104 462 aaKnown RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 PLIN5Q00G26 463 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 RELQ04864 619 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 GAGE2BQ13066 116 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 GTF2H2Q13888 395 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 MELKQ14680 651 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 SNAPC1Q16533 368 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CCL14Q16627 93 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 GAGE2EQ4V326 116 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 C9orf152Q5JTZ5 239 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ERMARDQ5T6L9 678 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 EEF1A1P5Q5VTE0 462 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 IRAK1BP1Q5VVH5 260 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 C9orf57Q5W0N0 161 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 GAGE2AQ6NT46 116 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 GTF2H2CQ6P1K8 395 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF704Q6ZNC4 412 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ASB18Q6ZVZ8 466 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 PLEKHM3Q6ZWE6 761 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 Q75L30 129 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF329Q86UD4 541 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ADIPOR2Q86V24 386 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CEP57Q86XR8 500 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 TMEM219Q86XT9 240 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 KMT5CQ86Y97 462 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 CERS5Q8N5B7 392 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 C1orf52Q8N6N3 182 aaKnown RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF441Q8N8Z8 693 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 TSPAN14Q8NG11 270 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 TAS1R2Q8TE23 839 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 LPGAT1Q92604 370 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 PGAP3Q96FM1 320 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-208ENST00000554785 DGAT2Q96PD7 388 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 DUX5Q96PT3 197 aa1.46□□□□□ -2.18
PRPF39-208ENST00000554785 SLC22A12Q96S37 553 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms