RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PTPRQQ9UMZ3 2332 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 CACNA1GO43497 2377 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 ANKRD11Q6UB99 2663 aaPredicted RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 C3orf70A6NLC5 250 aaPredicted RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 SRRM3A6NNA2 597 aaPredicted RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 ZNF487B1APH4 448 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 AKR1B15C9JRZ8 316 aaPredicted RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 SCAMP1O15126 338 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 GCATO75600 419 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 RECQL5O94762 991 aaPredicted RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 HEXIM1O94992 359 aaKnown RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 PGLSO95336 258 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 HLA-DQB2P05538 268 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 KRT7P08729 469 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 CKMT1AP12532 417 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 MYF5P13349 255 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 CKMT2P17540 419 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 LHCGRP22888 699 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 GARSP41250 739 aaKnown RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 SSR1P43307 286 aaKnown RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 MMP13P45452 471 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 ANXA11P50995 505 aaKnown RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 RENBPP51606 427 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 C21orf58P58505 322 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 KIAA1024LP59773 190 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 HNRNPKP61978 463 aaKnown RBP eCLIP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 YPEL5P62699 121 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 GBE1Q04446 702 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 BCL2L1Q07817 233 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 NIPAL4Q0D2K0 466 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 SLC10A2Q12908 348 aaPredicted RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 PTK2BQ14289 1009 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 ZNF235Q14590 738 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 PDK2Q15119 407 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 HADHQ16836 314 aaKnown RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 ALG11Q2TAA5 492 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 ANKRD20A8PQ5CZ79 823 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 CFAP58Q5T655 872 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 TSTD2Q5T7W7 516 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 ERAP2Q6P179 960 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 GUSBP11Q6P575 273 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 VWA1Q6PCB0 445 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 ZBTB46Q86UZ6 589 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 PLD5Q8N7P1 536 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 TC2NQ8N9U0 490 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 FAM98AQ8NCA5 519 aaKnown RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 SLC35G2Q8TBE7 412 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 LMX1AQ8TE12 382 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 RGMAQ96B86 450 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 HDAC11Q96DB2 347 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 DTD2Q96FN9 168 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 PDXPQ96GD0 296 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 PDLIM2Q96JY6 352 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 APOLD1Q96LR9 279 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 TSGA13Q96PP4 275 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 SMIM14Q96QK8 99 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 MCCC1Q96RQ3 725 aaPredicted RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 CLPBQ9H078 707 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 ATP13A3Q9H7F0 1226 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 NHEJ1Q9H9Q4 299 aaPredicted RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 NOD2Q9HC29 1040 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 CPNE5Q9HCH3 593 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 NT5MQ9NPB1 228 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 SPASTQ9UBP0 616 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 APOBEC3BQ9UH17 382 aaKnown RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 LCMT1Q9UIC8 334 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 CSNK1G3Q9Y6M4 447 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 COX11Q9Y6N1 276 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 BSNQ9UPA5 3926 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 SCN8AQ9UQD0 1980 aa4.13□□□□□ -1.75
VTI1B-203ENST00000554636 SMG1Q96Q15 3661 aaKnown RBP4.13□□□□□ -1.75
VTI1B-203ENST00000554636 AHCTF1Q8WYP5 2266 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 UNC13CQ8NB66 2214 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 A0A1W2PQ67 120 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 TRABD2BA6NFA1 517 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 NEMP2A6NFY4 417 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 NPIPB15A6NHN6 443 aaPredicted RBP4.12□□□□□ -1.75
VTI1B-203ENST00000554636 LRRC3CA6NJW4 275 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 LMO7DNF2Z398 122 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 F5H697 171 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 PSMD11O00231 422 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 TPP1O14773 563 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 AQP9O43315 295 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 LCA5LO95447 670 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 MATN4O95460 622 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 MT-CO3P00414 261 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 SOD1P00441 154 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 AHSGP02765 367 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 GP1BAP07359 652 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 MMP2P08253 660 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 PDHA1P08559 390 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 HOXC4P09017 264 aaPredicted RBP4.12□□□□□ -1.75
VTI1B-203ENST00000554636 TPM1P09493 284 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 ALPIP09923 528 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 ELFN1P0C7U0 828 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 ALPPL2P10696 532 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 CDK4P11802 303 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 TSHRP16473 764 aa4.12□□□□□ -1.75
VTI1B-203ENST00000554636 CTPS1P17812 591 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms