RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 FSCN1Q16658 493 aaKnown RBP9.33□□□□□ -0.92
SIX4-202ENST00000554079 FUT11Q495W5 492 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 PAGE3Q5JUK9 113 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 PDZK1Q5T2W1 519 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 SH3PXD2AQ5TCZ1 1133 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 KIAA0319Q5VV43 1072 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 PLET1Q6UQ28 207 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 ENPP6Q6UWR7 440 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 SNX20Q7Z614 316 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 CLHC1Q8NHS4 586 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 CLEC4DQ8WXI8 215 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 TFAP2BQ92481 460 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 KIAA1191Q96A73 305 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 SENP8Q96LD8 212 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 QRFPRQ96P65 431 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 P2RY13Q9BPV8 354 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 FAM213AQ9BRX8 229 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 CNPY3Q9BT09 278 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 BARHL1Q9BZE3 327 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 PIF1Q9H611 641 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 AKTIPQ9H8T0 292 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 ACTR10Q9NZ32 417 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 TRPM5Q9NZQ8 1165 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 CTSFQ9UBX1 484 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 GIMAP2Q9UG22 337 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 MGAT4AQ9UM21 535 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 KCNK7Q9Y2U2 307 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 NRXN2Q9P2S2 1712 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 MGAMO43451 1857 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 A0A1W2PPL8 197 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 RAB19A4D1S5 217 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 KRBOX1C9JBD0 128 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 K7ERI5 159 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 SCAMP3O14828 347 aaKnown RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 MUSKO15146 869 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 PLOD3O60568 738 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 EEDO75530 441 aaKnown RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 NTSR2O95665 410 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 C1RP00736 705 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 GGT1P19440 569 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 ADRA1BP35368 520 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 MAP2K3P46734 347 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 CLCN4P51793 760 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 SNAP25P60880 206 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 RIPPLY1Q0D2K3 151 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 FGFBP1Q14512 234 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 SMAD2Q15796 467 aaKnown RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 CLEC6AQ6EIG7 209 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 C19orf48Q6RUI8 117 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 DPP8Q6V1X1 898 aaPredicted RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 RTL4Q6ZR62 310 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 METTL23Q86XA0 190 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 SPATA2LQ8IUW3 424 aaPredicted RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 ZZZ3Q8IYH5 903 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 ADGRG2Q8IZP9 1017 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 ZNF565Q8N9K5 539 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 DUSP18Q8NEJ0 188 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 OR11H4Q8NGC9 324 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 TSPEARQ8WU66 669 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 APH1BQ8WW43 257 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 SLC5A11Q8WWX8 675 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 USP7Q93009 1102 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 AKT1S1Q96B36 256 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 UPRTQ96BW1 309 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 TUBGCP3Q96CW5 907 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 CCDC126Q96EE4 140 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 ZNF668Q96K58 619 aaPredicted RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 DPYSL5Q9BPU6 564 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 UCK1Q9HA47 277 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 NMUR1Q9HB89 426 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 EML4Q9HC35 981 aaKnown RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 SPON1Q9HCB6 807 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 SDR39U1Q9NRG7 319 aaPredicted RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 GSN-AS1Q9NRJ2 163 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 CATSPERZQ9NTU4 200 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 MED9Q9NWA0 146 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 GABRQQ9UN88 632 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 KLK4Q9Y5K2 254 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 ORC6Q9Y5N6 252 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 A0A0A0MRY4 1105 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 TRAV19A0A0A6YYK7 116 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 A8MXK9 166 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 UBFD1O14562 309 aaKnown RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 SIGLEC6O43699 453 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 SLC43A1O75387 559 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 GPX5O75715 221 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 H2AFB1P0C5Y9 115 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 H2AFB2P0C5Z0 115 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 CYP19A1P11511 503 aaPredicted RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 CYP4B1P13584 511 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 CPB1P15086 417 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 TAL1P17542 331 aaPredicted RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 IGFBP5P24593 272 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 KCNQ1P51787 676 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 SIM2Q14190 667 aaPredicted RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 GRB7Q14451 532 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 VEPH1Q14D04 833 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 TSC22D1Q15714 1073 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 KYAT1Q16773 422 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 PABPC1L2AQ5JQF8 200 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms