RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 MS4A10Q96PG2 267 aa4.91□□□□□ -1.62
FOXN3-206ENST00000554005 PKP4Q99569 1192 aa4.91□□□□□ -1.62
FOXN3-206ENST00000554005 POLR3CQ9BUI4 534 aaPredicted RBP4.91□□□□□ -1.62
FOXN3-206ENST00000554005 GPR88Q9GZN0 384 aa4.91□□□□□ -1.62
FOXN3-206ENST00000554005 FKRPQ9H9S5 495 aa4.91□□□□□ -1.62
FOXN3-206ENST00000554005 OLAHQ9NV23 265 aa4.91□□□□□ -1.62
FOXN3-206ENST00000554005 CWC25Q9NXE8 425 aaPredicted RBP4.91□□□□□ -1.62
FOXN3-206ENST00000554005 NPAP1Q9NZP6 1156 aa4.91□□□□□ -1.62
FOXN3-206ENST00000554005 WDR35Q9P2L0 1181 aa4.91□□□□□ -1.62
FOXN3-206ENST00000554005 KIAA1551Q9HCM1 1747 aa4.9□□□□□ -1.62
FOXN3-206ENST00000554005 A0A0G2JNG1 304 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 TEX13DA0A0J9YY54 714 aaPredicted RBP4.9□□□□□ -1.63
FOXN3-206ENST00000554005 FEZF1A0PJY2 475 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 DENND3A2RUS2 1198 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 TBX10O75333 385 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 PDE9AO76083 593 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 TRUB2O95900 331 aaKnown RBP4.9□□□□□ -1.63
FOXN3-206ENST00000554005 LDLRP01130 860 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 PCCAP05165 728 aaPredicted RBP4.9□□□□□ -1.63
FOXN3-206ENST00000554005 LIPFP07098 398 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 CCDC172P0C7W6 258 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 MYBL1P10243 752 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 DGKAP23743 735 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 CPT2P23786 658 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 TKTP29401 623 aaKnown RBP4.9□□□□□ -1.63
FOXN3-206ENST00000554005 TERF1P54274 439 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 PNRC1Q12796 327 aaPredicted RBP4.9□□□□□ -1.63
FOXN3-206ENST00000554005 PLA2G7Q13093 441 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 KIR2DS5Q14953 304 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 NR1D2Q14995 579 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 SLC15A2Q16348 729 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 LETM2Q2VYF4 491 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 CRY2Q49AN0 593 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 ZNF628Q5EBL2 1059 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 PIWIL4Q7Z3Z4 852 aaKnown RBP4.9□□□□□ -1.63
FOXN3-206ENST00000554005 TMEM173Q86WV6 379 aaPredicted RBP4.9□□□□□ -1.63
FOXN3-206ENST00000554005 PTOV1Q86YD1 416 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 KBTBD3Q8NAB2 608 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 POC1AQ8NBT0 407 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 RDM1Q8NG50 284 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 RADILQ96JH8 1075 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 CNDP2Q96KP4 475 aaKnown RBP4.9□□□□□ -1.63
FOXN3-206ENST00000554005 PAIP2Q9BPZ3 127 aaKnown RBP4.9□□□□□ -1.63
FOXN3-206ENST00000554005 OR10A4Q9H209 315 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 DPAGT1Q9H3H5 408 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 RABEP2Q9H5N1 569 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 RETREG1Q9H6L5 497 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 ANKZF1Q9H8Y5 726 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 EQTNQ9NQ60 294 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 CCDC177Q9NQR7 707 aaPredicted RBP4.9□□□□□ -1.63
FOXN3-206ENST00000554005 ABCF3Q9NUQ8 709 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 DDX25Q9UHL0 483 aaKnown RBP4.9□□□□□ -1.63
FOXN3-206ENST00000554005 NIP7Q9Y221 180 aaKnown RBP eCLIP4.9□□□□□ -1.63
FOXN3-206ENST00000554005 UBN2Q6ZU65 1347 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 CDHR2Q9BYE9 1310 aa4.9□□□□□ -1.63
FOXN3-206ENST00000554005 NRXN2Q9P2S2 1712 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 DLEC1Q9Y238 1755 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 A0A0B4J293 547 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 A0A1W2PS18 150 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 ANKUB1A6NFN9 424 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 A8MXE2 369 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 XRCC3O43542 346 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 SPRY1O43609 319 aaPredicted RBP4.89□□□□□ -1.63
FOXN3-206ENST00000554005 HMMRO75330 724 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 MED24O75448 989 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 TFAP2AP05549 437 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 CSF2RAP15509 400 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 MC5RP33032 325 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 PITX1P78337 314 aaPredicted RBP4.89□□□□□ -1.63
FOXN3-206ENST00000554005 PRKAA1Q13131 559 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 RABL6Q3YEC7 729 aaPredicted RBP4.89□□□□□ -1.63
FOXN3-206ENST00000554005 SIRPB2Q5JXA9 342 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 NDUFAF5Q5TEU4 345 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 C6orf163Q5TEZ5 329 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 KLC3Q6P597 504 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 PACS1Q6VY07 963 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 KCTD8Q6ZWB6 473 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 SMIM5Q71RC9 77 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 PPP1R42Q7Z4L9 355 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 LONP2Q86WA8 852 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 DAZLQ92904 295 aaKnown RBP4.89□□□□□ -1.63
FOXN3-206ENST00000554005 ABHD8Q96I13 439 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 LINC00615Q96LM1 132 aaPredicted RBP4.89□□□□□ -1.63
FOXN3-206ENST00000554005 MYCBPQ99417 103 aaPredicted RBP4.89□□□□□ -1.63
FOXN3-206ENST00000554005 BAG1Q99933 345 aaPredicted RBP4.89□□□□□ -1.63
FOXN3-206ENST00000554005 LRRC1Q9BTT6 524 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 ABHD6Q9BV23 337 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 NYXQ9GZU5 481 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 ANKRD2Q9GZV1 360 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 TSPYL1Q9H0U9 437 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 TBC1D17Q9HA65 648 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 OSER1Q9NX31 292 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 GIMAP2Q9UG22 337 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 SH3TC1Q8TE82 1336 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 CARMIL3Q8ND23 1372 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 RIC1Q4ADV7 1423 aa4.89□□□□□ -1.63
FOXN3-206ENST00000554005 ANKRD36CQ5JPF3 1778 aa4.88□□□□□ -1.63
FOXN3-206ENST00000554005 BRCA1P38398 1863 aaKnown RBP4.88□□□□□ -1.63
FOXN3-206ENST00000554005 URADA6NGE7 173 aa4.88□□□□□ -1.63
FOXN3-206ENST00000554005 OR10H2O60403 315 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms