RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 DUS3LQ96G46 650 aaKnown RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 MSANTD3Q96H12 275 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 ZFYVE19Q96K21 471 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 CLPTM1LQ96KA5 538 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 KCNA7Q96RP8 456 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 ZNF587Q96SQ5 575 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 GPATCH1Q9BRR8 931 aaKnown RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 C1QTNF7Q9BXJ2 289 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 S1PR5Q9H228 398 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 IGFLR1Q9H665 355 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 ACTR8Q9H981 624 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 CERS4Q9HA82 394 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 ITM2CQ9NQX7 267 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 C1orf109Q9NX04 203 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 DNAJB12Q9NXW2 375 aaKnown RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 ABCD2Q9UBJ2 740 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 NKX1-2Q9UD57 310 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 CD84Q9UIB8 345 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 G3BP2Q9UN86 482 aaKnown RBP7.12□□□□□ -1.27
ATXN3-221ENST00000553498 BTRCQ9Y297 605 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 CCL27Q9Y4X3 112 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 TIMM22Q9Y584 194 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 PCDHGA7Q9Y5G6 932 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 FADS3Q9Y5Q0 445 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 STON1Q9Y6Q2 735 aa7.12□□□□□ -1.27
ATXN3-221ENST00000553498 PTPRSQ13332 1948 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 KANSL1LA0AUZ9 987 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 OTOL1A6NHN0 477 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-221ENST00000553498 CCDC154A6NI56 674 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 AQP12BA6NM10 295 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 ZNF839A8K0R7 811 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 ANHXE9PGG2 379 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 H0Y3Z8 333 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 MANBAO00462 879 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 FBP2O00757 339 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 ACOT8O14734 319 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 CASQ2O14958 399 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-221ENST00000553498 NVLO15381 856 aaKnown RBP7.11□□□□□ -1.27
ATXN3-221ENST00000553498 KRT36O76013 467 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 PDE5AO76074 875 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 IL6P05231 212 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 JUPP14923 745 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 PRDX3P30048 256 aaKnown RBP7.11□□□□□ -1.27
ATXN3-221ENST00000553498 GDI1P31150 447 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 IL12RB1P42701 662 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 CLCN2P51788 898 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 CLNS1AP54105 237 aaKnown RBP7.11□□□□□ -1.27
ATXN3-221ENST00000553498 SEMG2Q02383 582 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 CEACAM7Q14002 265 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 CCNIQ14094 377 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 E2F2Q14209 437 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 STARD3Q14849 445 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 COL19A1Q14993 1142 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 CST6Q15828 149 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 IMPG1Q17R60 797 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 DPY19L1Q2PZI1 675 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 MUM1Q2TAK8 710 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 PTCHD3Q3KNS1 767 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 AASDHQ4L235 1098 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-221ENST00000553498 ZNF658BQ4V348 819 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-221ENST00000553498 LRRC73Q5JTD7 316 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 ZNF776Q68DI1 518 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-221ENST00000553498 RAET1GQ6H3X3 334 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 KIAA1161Q6NSJ0 714 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 NEK5Q6P3R8 708 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 TMEM220Q6QAJ8 160 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 DET1Q7L5Y6 550 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 DHDDSQ86SQ9 333 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 ZFAND4Q86XD8 727 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 AQP12AQ8IXF9 295 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 SFRP1Q8N474 314 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 TNIP2Q8NFZ5 429 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 OR2L2Q8NH16 312 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 OR56A3Q8NH54 315 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 CSGALNACT1Q8TDX6 532 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 SLC26A7Q8TE54 656 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 DNAJC9Q8WXX5 260 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 ZUFSPQ96AP4 578 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 CMTM7Q96FZ5 175 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 COX14Q96I36 57 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 HIC2Q96JB3 615 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 MARK4Q96L34 752 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 MYADMQ96S97 322 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 ACOX2Q99424 681 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 NPAS2Q99743 824 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 SH3GL1Q99961 368 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 P2RY13Q9BPV8 354 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 EFHD1Q9BUP0 239 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 OSBPL6Q9BZF3 934 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 EHD1Q9H4M9 534 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 ELOVL6Q9H5J4 265 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 C8orf33Q9H7E9 229 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-221ENST00000553498 RMI1Q9H9A7 625 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 BRF2Q9HAW0 419 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 LRTM1Q9HBL6 345 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 FBRSL1Q9HCM7 1045 aaKnown RBP7.11□□□□□ -1.27
ATXN3-221ENST00000553498 BATF3Q9NR55 127 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 NMRK1Q9NWW6 199 aa7.11□□□□□ -1.27
ATXN3-221ENST00000553498 ADA2Q9NZK5 511 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms