RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TYK2P29597 1187 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 PDX1P52945 283 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 MAPK10P53779 464 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 ARSFP54793 590 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 CDKN2DP55273 166 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 MC1RQ01726 317 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 CFHR1Q03591 330 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 PRDX1Q06830 199 aaKnown RBP9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 FOXM1Q08050 763 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 TUBB3Q13509 450 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 C16orf72Q14CZ0 275 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 TSNAXIP1Q2TAA8 658 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 FAM214AQ32MH5 1076 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 THEMIS2Q5TEJ8 643 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 NIPAL1Q6NVV3 410 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 DUS1LQ6P1R4 473 aaKnown RBP9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 TLDC1Q6P9B6 456 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 XKR5Q6UX68 686 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 CYHR1Q6ZMK1 362 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 PROSER1Q86XN7 944 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 RASGRP3Q8IV61 690 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 ESX1Q8N693 406 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 LKAAEAR1Q8TD35 194 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 KCNE4Q8WWG9 221 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 SLC44A1Q8WWI5 657 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 THAP11Q96EK4 314 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 MAP3K3Q99759 626 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 MCMBPQ9BTE3 642 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 PITHD1Q9GZP4 211 aaPredicted RBP9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 TWSG1Q9GZX9 223 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 PLAC1Q9HBJ0 212 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 FGF21Q9NSA1 209 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 PLCL2Q9UPR0 1127 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 MED16Q9Y2X0 877 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 PCDHB3Q9Y5E6 796 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 ANKRD11Q6UB99 2663 aaPredicted RBP9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 IGHV5-51A0A0C4DH38 117 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 ARHGEF33A8MVX0 844 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 BTN3A3O00478 584 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 CPNE3O75131 537 aaKnown RBP9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 ERLIN1O75477 346 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 SLC16A8O95907 504 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 RBP1P09455 135 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 LTA4HP09960 611 aaKnown RBP9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 CCDC166P0CW27 439 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 SPINK2P20155 84 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 CXCR2P25025 360 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 GSTM2P28161 218 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 SLC5A2P31639 672 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 SEPHS1P49903 392 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 GFERP55789 205 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 ITGA1P56199 1179 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 TAS2R39P59534 338 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 NAA20P61599 178 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 RASA2Q15283 850 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 TRADDQ15628 312 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 ZKSCAN8Q15776 578 aaPredicted RBP9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 UAP1Q16222 522 aaPredicted RBP9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 MANEAQ5SRI9 462 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 RBM20Q5T481 1227 aaKnown RBP9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 SULT1C3Q6IMI6 304 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 NAPRTQ6XQN6 538 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 C17orf64Q86WR6 236 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 RIBC1Q8N443 379 aaPredicted RBP9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 C19orf47Q8N9M1 422 aaKnown RBP9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 RCBTB1Q8NDN9 531 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 GIMAP7Q8NHV1 300 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 RHEBL1Q8TAI7 183 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 ACMSDQ8TDX5 336 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 NAT14Q8WUY8 206 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 USP7Q93009 1102 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 FAM136AQ96C01 138 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 FBXL8Q96CD0 374 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 SEC16BQ96JE7 1060 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 VPS50Q96JG6 964 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 LRFN5Q96NI6 719 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 TRAPPC9Q96Q05 1148 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 OR2A14Q96R47 310 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 OR6C1Q96RD1 312 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 CAAP1Q9H8G2 361 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 MRPS30Q9NP92 439 aaKnown RBP9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 ASCL3Q9NQ33 180 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 KCND3Q9UK17 655 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 OARD1Q9Y530 152 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 TNPO3Q9Y5L0 923 aaKnown RBP9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 PSAT1Q9Y617 370 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 KCNE2Q9Y6J6 123 aa9.91□□□□□ -0.82
TRAFD1-208ENST00000552890 URB1O60287 2271 aaKnown RBP9.9□□□□□ -0.82
TRAFD1-208ENST00000552890 AHCTF1Q8WYP5 2266 aa9.9□□□□□ -0.82
TRAFD1-208ENST00000552890 A0A087WV48 116 aa9.9□□□□□ -0.82
TRAFD1-208ENST00000552890 SLC9B1P1A6NJY1 282 aa9.9□□□□□ -0.82
TRAFD1-208ENST00000552890 E7ENX8 843 aa9.9□□□□□ -0.82
TRAFD1-208ENST00000552890 E7EQ34 232 aa9.9□□□□□ -0.82
TRAFD1-208ENST00000552890 PRPF4O43172 522 aaKnown RBP eCLIP9.9□□□□□ -0.82
TRAFD1-208ENST00000552890 RIPK2O43353 540 aa9.9□□□□□ -0.82
TRAFD1-208ENST00000552890 TOP3BO95985 862 aaKnown RBP9.9□□□□□ -0.82
TRAFD1-208ENST00000552890 FGF3P11487 239 aaPredicted RBP9.9□□□□□ -0.82
TRAFD1-208ENST00000552890 EZRP15311 586 aaKnown RBP9.9□□□□□ -0.82
TRAFD1-208ENST00000552890 AGXTP21549 392 aa9.9□□□□□ -0.82
TRAFD1-208ENST00000552890 MPSTP25325 297 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms