RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SMYD2Q9NRG4 433 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 TMEM184BQ9Y519 407 aaPredicted RBP17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 FAM159BA6NKW6 160 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 GFYI3L273 518 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 PIAS1O75925 651 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 RPA3P35244 121 aaPredicted RBP17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 GP5P40197 560 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 PNLIPRP1P54315 467 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 CXADRP78310 365 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 TIAL1Q01085 375 aaKnown RBP eCLIP17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 NAB1Q13506 487 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 CYP2A13Q16696 494 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 CYHR1Q6ZMK1 362 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 CCDC81Q6ZN84 652 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 VASH2Q86V25 355 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 SPNS2Q8IVW8 549 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 SYTL1Q8IYJ3 562 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 PPM1NQ8N819 430 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 FLVCR1-AS1Q8TAF5 88 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 DENND1AQ8TEH3 1009 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 FBF1Q8TES7 1133 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 RNF31Q96EP0 1072 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 TSPAN17Q96FV3 270 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 PKP4Q99569 1192 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 IRAK4Q9NWZ3 460 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 PILRAQ9UKJ1 303 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 LHX6Q9UPM6 363 aa17.82■□□□□ 0.44
PRPF40B-216ENST00000552301 SNRNP200O75643 2136 aaKnown RBP17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 CXorf49A8MYA2 514 aaPredicted RBP17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 SLC16A5O15375 505 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 CPNE3O75131 537 aaKnown RBP17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 SCRG1O75711 98 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 DLGAP3O95886 979 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 MT-ND3P03897 115 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 HIST1H2AGP0C0S8 130 aaPredicted RBP17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 ZNF28P17035 718 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 HIST1H2ADP20671 130 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 MAGP20916 626 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 MAP7Q14244 749 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 NAA25Q14CX7 972 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 KBTBD12Q3ZCT8 623 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 PWWP2BQ6NUJ5 590 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 C6orf15Q6UXA7 325 aaPredicted RBP17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 CDHR3Q6ZTQ4 885 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 FAM20CQ8IXL6 584 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 IFT20Q8IY31 132 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 GPR135Q8IZ08 494 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 GALNT6Q8NCL4 622 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 NKD1Q969G9 470 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 ZNF501Q96CX3 271 aaPredicted RBP17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 HIST1H2AHQ96KK5 128 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 HIST1H2AJQ99878 128 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 H2AFJQ9BTM1 129 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 TRIM54Q9BYV2 358 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 SLC7A5P2Q9GIP4 190 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 TWSG1Q9GZX9 223 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 SERTAD3Q9UJW9 196 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 CHD6Q8TD26 2715 aa17.81■□□□□ 0.44
PRPF40B-216ENST00000552301 DMXL2Q8TDJ6 3036 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 CCNDBP1O95273 360 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 SLC16A8O95907 504 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 RHOXF2BP0C7M4 288 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 CCNYL3P0C7X3 344 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 MSL3P1P0C860 447 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 ERGP11308 486 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 ZNF37AP17032 561 aaPredicted RBP17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 PSMB5P28074 263 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 CMPK1P30085 196 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 ITGA1P56199 1179 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 POU4F1Q01851 419 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 FASTKQ14296 549 aaKnown RBP17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 DEFB110Q30KQ9 67 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 THEMIS2Q5TEJ8 643 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 NKAPQ8N5F7 415 aaKnown RBP17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 ZSCAN1Q8NBB4 408 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 RBBP8Q99708 897 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 MIPEPQ99797 713 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 RHOXF2Q9BQY4 288 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 EFHD1Q9BUP0 239 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 ACAT2Q9BWD1 397 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 CHRNA10Q9GZZ6 450 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 PARVBQ9HBI1 364 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 CPNE5Q9HCH3 593 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 ZZEF1O43149 2961 aa17.8■□□□□ 0.44
PRPF40B-216ENST00000552301 E7EQ34 232 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 TIAF1O95411 115 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 NTRK1P04629 796 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 SPRP35270 261 aaPredicted RBP17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 PGGT1BP53609 377 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 TAS2R39P59534 338 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 VAC14Q08AM6 782 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 ABHD18Q0P651 414 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 USP10Q14694 798 aaKnown RBP17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 ZIC1Q15915 447 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 GRTP1Q5TC63 336 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 FIGLAQ6QHK4 219 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 SUSD1Q6UWL2 747 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 TIPARPQ7Z3E1 657 aaKnown RBP17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 OR2L3Q8NG85 312 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 OR1L3Q8NH93 324 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms