RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 TSPAN8P19075 237 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 HRH2P25021 359 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 SHMT2P34897 504 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 ACTR1BP42025 376 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 GDF5P43026 501 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 ACTR1AP61163 376 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 IRF8Q02556 426 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 TAP2Q03519 686 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 CSTF3Q12996 717 aaKnown RBP13.79□□□□□ -0.2
LETMD1-229ENST00000551261 FZD2Q14332 565 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 GRB7Q14451 532 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 SQLEQ14534 574 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 NAA25Q14CX7 972 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 ELOCQ15369 112 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 MAPRE2Q15555 327 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 ZRSR2Q15696 482 aaKnown RBP13.79□□□□□ -0.2
LETMD1-229ENST00000551261 GSTA3Q16772 222 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 FBXO48Q5FWF7 155 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 PRAMEF14Q5SWL7 426 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 VWA5B1Q5TIE3 1220 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 PRAMEF13Q5VWM6 474 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 TRIM46Q7Z4K8 759 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 HID1Q8IV36 788 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 PHACTR4Q8IZ21 702 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 CDYL2Q8N8U2 506 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 OR2L8Q8NGY9 312 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 USP7Q93009 1102 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 ESAMQ96AP7 390 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 MOCOSQ96EN8 888 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 PTCD3Q96EY7 689 aaKnown RBP13.79□□□□□ -0.2
LETMD1-229ENST00000551261 HSPA12BQ96MM6 686 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 SLC6A18Q96N87 628 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 INSM2Q96T92 566 aaPredicted RBP13.79□□□□□ -0.2
LETMD1-229ENST00000551261 ATG10Q9H0Y0 220 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 ELOVL6Q9H5J4 265 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 ACSS2Q9NR19 701 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 IMP3Q9NV31 184 aaKnown RBP13.79□□□□□ -0.2
LETMD1-229ENST00000551261 ZNF225Q9UK10 706 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 FBXO4Q9UKT5 387 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 PSMD13Q9UNM6 376 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 FIS1Q9Y3D6 152 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 TSC22D4Q9Y3Q8 395 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 PCDHGA11Q9Y5H2 935 aa13.79□□□□□ -0.2
LETMD1-229ENST00000551261 A6NCN8 305 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 E9PBE3 544 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 H0YIV9 168 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 PPP6CO00743 305 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 VILLO15195 856 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 UBDO15205 165 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 KLHL41O60662 606 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 WFS1O76024 890 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 FKBP9O95302 570 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 CSF2P04141 144 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 PRR35P0CG20 571 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 CTSEP14091 401 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 IDO1P14902 403 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 NME1P15531 152 aaKnown RBP13.78□□□□□ -0.2
LETMD1-229ENST00000551261 PRPH2P23942 346 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 CXCR2P25025 360 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 RPL10P27635 214 aaKnown RBP13.78□□□□□ -0.2
LETMD1-229ENST00000551261 GSTM2P28161 218 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 PKLRP30613 574 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 CNR2P34972 360 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 ACADVLP49748 655 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 AFF3P51826 1226 aaKnown RBP13.78□□□□□ -0.2
LETMD1-229ENST00000551261 PHEXP78562 749 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 ABATP80404 500 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 SF3A3Q12874 501 aaKnown RBP eCLIP13.78□□□□□ -0.21e-8■□□□□ 9.9
LETMD1-229ENST00000551261 HERC3Q15034 1050 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 TEAD4Q15561 434 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 RPE65Q16518 533 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 HIST2H2ACQ16777 129 aaPredicted RBP13.78□□□□□ -0.2
LETMD1-229ENST00000551261 C18orf21Q32NC0 220 aaPredicted RBP13.78□□□□□ -0.2
LETMD1-229ENST00000551261 ATP6AP1LQ52LC2 224 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 ATG9BQ674R7 924 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 NXNQ6DKJ4 435 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 HIST2H2AA3Q6FI13 130 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 LARP4Q71RC2 724 aaKnown RBP eCLIP13.78□□□□□ -0.2
LETMD1-229ENST00000551261 RABEPKQ7Z6M1 372 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 LRRC56Q8IYG6 542 aaPredicted RBP13.78□□□□□ -0.2
LETMD1-229ENST00000551261 FAM160A2Q8N612 972 aaPredicted RBP13.78□□□□□ -0.2
LETMD1-229ENST00000551261 SPDYE1Q8NFV5 336 aaPredicted RBP13.78□□□□□ -0.2
LETMD1-229ENST00000551261 SLC5A11Q8WWX8 675 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 SLC22A18Q96BI1 424 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 TUBGCP3Q96CW5 907 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 CXorf40BQ96DE9 158 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 CAMK1GQ96NX5 476 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 OR52B2Q96RD2 323 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 FERD3LQ96RJ6 166 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 ZNF385DQ9H6B1 395 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 WDR55Q9H6Y2 383 aaPredicted RBP13.78□□□□□ -0.2
LETMD1-229ENST00000551261 PELI2Q9HAT8 420 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 TNFRSF12AQ9NP84 129 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 CD320Q9NPF0 282 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 OR6C2Q9NZP2 312 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 APOBEC3BQ9UH17 382 aaKnown RBP13.78□□□□□ -0.2
LETMD1-229ENST00000551261 ADGRE2Q9UHX3 823 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 CA5BQ9Y2D0 317 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 TMED5Q9Y3A6 229 aa13.78□□□□□ -0.2
LETMD1-229ENST00000551261 CAPN14A8MX76 684 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms