RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 SERPINB7O75635 380 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 RB1P06400 928 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 CKMP06732 381 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 HNRNPA1P09651 372 aaKnown RBP eCLIP10.82□□□□□ -0.68
LINC00661-204ENST00000549354 FDXRP22570 491 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 HTR1BP28222 390 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 CTNNB1P35222 781 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 SEPHS1P49903 392 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 IL2P60568 153 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 PRKG2Q13237 762 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 KCNAB2Q13303 367 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 CDH18Q13634 790 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 RCAN2Q14206 197 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 CTU2Q2VPK5 515 aaKnown RBP10.82□□□□□ -0.68
LINC00661-204ENST00000549354 XAF1Q6GPH4 301 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 PRMT9Q6P2P2 845 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 HACD2Q6Y1H2 254 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 THAP5Q7Z6K1 395 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 SLCO6A1Q86UG4 719 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 TTC30BQ8N4P2 665 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 ZFP90Q8TF47 636 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 NRBF2Q96F24 287 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 ABHD8Q96I13 439 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 CORO1BQ9BR76 489 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 C2orf49Q9BVC5 232 aaPredicted RBP10.82□□□□□ -0.68
LINC00661-204ENST00000549354 ASB8Q9H765 288 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 INTS10Q9NVR2 710 aaKnown RBP10.82□□□□□ -0.68
LINC00661-204ENST00000549354 PTBP2Q9UKA9 531 aaKnown RBP10.82□□□□□ -0.68
LINC00661-204ENST00000549354 MYOFQ9NZM1 2061 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 VPS26AO75436 327 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 CLPXO76031 633 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 PTPN2P17706 415 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 PBLDP30039 288 aaPredicted RBP10.82□□□□□ -0.68
LINC00661-204ENST00000549354 NKX2-5P52952 324 aaPredicted RBP10.82□□□□□ -0.68
LINC00661-204ENST00000549354 PHKG1Q16816 387 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 SYT16Q17RD7 645 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF773Q6PK81 442 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 DHRS4L2Q6PKH6 230 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 HMGN2P46Q86SG4 172 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 CMTM8Q8IZV2 173 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 APCDD1Q8J025 514 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 SPARTQ8N0X7 666 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 CACTIN-AS1Q8N1I8 211 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 C7orf57Q8NEG2 295 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 OR13F1Q8NGS4 319 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 VOPP1Q96AW1 172 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 BARD1Q99728 777 aaKnown RBP10.82□□□□□ -0.68
LINC00661-204ENST00000549354 KLHL25Q9H0H3 589 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 SLC6A13Q9NSD5 602 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 ABCB8Q9NUT2 735 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 TUBA8Q9NY65 449 aaPredicted RBP10.82□□□□□ -0.68
LINC00661-204ENST00000549354 PSME2Q9UL46 239 aa10.82□□□□□ -0.68
LINC00661-204ENST00000549354 CCL16O15467 120 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 KDM1AO60341 852 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 SLC25A14O95258 325 aaPredicted RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 HSMCR30P0CW71 290 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 FCGR1AP12314 374 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 STC1P52823 247 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 RHOAP61586 193 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 ADARB1P78563 741 aaKnown RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 CD47Q08722 323 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 DAG1Q14118 895 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 MOGQ16653 247 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 AASDHQ4L235 1098 aaPredicted RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 PRSS36Q5K4E3 855 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 SULT1C3Q6IMI6 304 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 RETSATQ6NUM9 610 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 Q6ZSR9 355 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 DSG4Q86SJ6 1040 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 SLC7A5P1Q8MH63 180 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 C10orf111Q8N326 155 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 PACRGLQ8N7B6 248 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 BEND7Q8N7W2 519 aaPredicted RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF513Q8N8E2 541 aaPredicted RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 LKAAEAR1Q8TD35 194 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 OSCP1Q8WVF1 389 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 HTRA1Q92743 480 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 DUS3LQ96G46 650 aaKnown RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 TRIM54Q9BYV2 358 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 AMBRA1Q9C0C7 1298 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 CD320Q9NPF0 282 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 AIG1Q9NVV5 245 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 TSC22D4Q9Y3Q8 395 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 SNX5Q9Y5X3 404 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 NOTCH4Q99466 2003 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 MAP1BP46821 2468 aaKnown RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 LAMA1P25391 3075 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 KRBA1A5PL33 1030 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF821O75541 412 aaPredicted RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 CLDN7O95471 211 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 OPN1SWP03999 348 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 CD9P21926 228 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 MAPK8P45983 427 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 LMAN2Q12907 356 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 FAM98BQ52LJ0 330 aaKnown RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 PLPP4Q5VZY2 271 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 AFTPHQ6ULP2 937 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 TMEM179BQ7Z7N9 219 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 KIAA1958Q8N8K9 716 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 GPR156Q8NFN8 814 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms